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Summary Expression Phenotypes Gene Literature (28) GO Terms (5) Nucleotides (77) Proteins (39) Interactants (271) Wiki
XB-GENEPAGE-6540413

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for mmp13 - All

RefSeq mRNAs(2)
Models - Gene (22)
Models - mRNA (30)
mRNAs (5)
ESTs (3)

RefSeq mRNAs (2)

Accession Version name Length Protein Species
NM_001032335 matrix metallopeptidase 13 (collagenase 3) precursor 2200 bp NP_001027506 X. tropicalis
NM_001086405 uncharacterized protein LOC379564 precursor 1604 bp NP_001079874 X. laevis.S

Models - Gene (22)

Source Version Model Species
NCBI 10.0 XBXT10g003431 X. tropicalis
NCBI 10.1 XBXL10_1g11025 X. laevis.S
ENSEMBL 10.0 mmp13 X. tropicalis
JGI 9.1 Xelaev18016257m.g X. laevis.S
Xenbase 9.1 gene6150 X. tropicalis
Xenbase 9.2 gene4674 X. laevis.S
ENSEMBL 9.1 mmp13 X. tropicalis
JGI 8.0 Xetrov14010836m.g X. tropicalis
JGI 7.1 Xetro.B02004 X. tropicalis
JGI 7.2 Xelaev16044236m.g X. laevis.S
JGI 6.0 XeXenL6RMv10005578m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000022190 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_119000005 X. tropicalis
JGI 4.1 gw1.119.276.1 X. tropicalis
JGI 4.1 gw1.119.277.1 X. tropicalis
JGI 4.1 gw1.119.278.1 X. tropicalis
JGI 4.1 e_gw1.119.276.1 X. tropicalis
JGI 4.1 e_gw1.119.277.1 X. tropicalis
JGI 4.1 e_gw1.119.278.1 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_119000006 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_119000013 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_119000014 X. tropicalis

mRNAs based on gene models(30)

Source Version Model Species
NCBI 10.0 mRNA017397 X. tropicalis
NCBI 10.1 XBmRNA20757 X. laevis.S
ENSEMBL 10.0 ENSXETT00000105840 X. tropicalis
ENSEMBL 10.0 ENSXETT00000110094 X. tropicalis
ENSEMBL 10.0 ENSXETT00000111943 X. tropicalis
ENSEMBL 10.0 ENSXETT00000118071 X. tropicalis
ENSEMBL 10.0 ENSXETT00000106108 X. tropicalis
ENSEMBL 10.0 ENSXETT00000107606 X. tropicalis
ENSEMBL 10.0 ENSXETT00000048013 X. tropicalis
ENSEMBL 10.0 ENSXETT00000117787 X. tropicalis
ENSEMBL 10.0 ENSXETT00000048007 X. tropicalis
JGI 9.1 Xelaev18016257m X. laevis.S
Xenbase 9.2 rna13654 X. laevis.S
Xenbase 9.1 rna19856 X. tropicalis
ENSEMBL 9.1 ENSXETT00000048013 X. tropicalis
JGI 8.0 Xetrov14010836m X. tropicalis
JGI 7.1 Xetro.B02004.1 X. tropicalis
JGI 7.2 Xelaev16044236m X. laevis.S
JGI 6.0 XeXenL6RMv10005578m X. laevis.S
JGI 4.1 fgenesh1_pm.C_scaffold_119000005 X. tropicalis
ENSEMBL 4.1 ENSXETT00000048013 X. tropicalis
JGI 4.1 e_gw1.119.276.1 X. tropicalis
JGI 4.1 e_gw1.119.277.1 X. tropicalis
JGI 4.1 e_gw1.119.278.1 X. tropicalis
JGI 4.1 gw1.119.276.1 X. tropicalis
JGI 4.1 gw1.119.277.1 X. tropicalis
JGI 4.1 gw1.119.278.1 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_119000006 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_119000013 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_119000014 X. tropicalis

mRNAs from cDNA libraries (5)

Clone Accession Species Library Anatomy Stage
NM_001032335 X. tropicalis
IMAGE:6998776 BC098086 X. tropicalis
XM_031896056 X. tropicalis
IMAGE:4968661 BC056080 X. laevis.S
NM_001086405 X. laevis.S

ESTs (3)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8545897 EB470278 5' X. laevis.S NICHD_XGC_tail_m tail NF stage 56 to NF stage 62
IMAGE:6934585 CB944611 5' X. laevis.S NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:6932721 CB944267 5' X. laevis.S NICHD_XGC_Tad2 whole organism NF stage 62