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Summary Expression Phenotypes Gene Literature (0) GO Terms (0) Nucleotides (117) Proteins (36) Interactants (7) Wiki
XB-GENEPAGE-6467117

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for synpo2l - All

RefSeq mRNAs(4)
Models - Gene (21)
Models - mRNA (25)
mRNAs (4)
ESTs (47)

RefSeq mRNAs (4)

Accession Version name Length Protein Species
XM_002935764 XM_002935764.5 synaptopodin 2-like protein 7224 bp XP_002935810 X. tropicalis
XM_041568847 XM_041568847.1 XP_041424781.1 synaptopodin 2-like protein isoform X2 6281 bp XP_041424781 X. laevis.L
XM_018227603 XM_018227603.2 synaptopodin 2-like protein 7332 bp XP_018083092 X. laevis.S
XM_018225419 XM_018225419.2 synaptopodin 2-like protein isoform X1 6642 bp XP_018080908 X. laevis.L

Models - Gene (21)

Source Version Model Species
NCBI 10.0 XBXT10g016931 X. tropicalis
NCBI 10.1 XBXL10_1g30636 X. laevis.L
NCBI 10.1 XBXL10_1g32881 X. laevis.S
ENSEMBL 10.0 synpo2l X. tropicalis
JGI 9.1 Xelaev18034884m.g X. laevis.L
JGI 9.1 Xelaev18037140m.g X. laevis.S
Xenbase 9.1 gene17448 X. tropicalis
Xenbase 9.2 gene40693 X. laevis.L
Xenbase 9.2 gene20436 X. laevis.S
ENSEMBL 9.1 gsx2 X. tropicalis
JGI 7.1 Xetro.G00795 X. tropicalis
JGI 6.0 XeXenL6RMv10008955m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000026430 X. tropicalis
JGI 4.1 ensembl.C_scaffold_168000021 X. tropicalis
JGI 4.1 e_gw1.168.2.1 X. tropicalis
JGI 4.1 e_gw1.168.97.1 X. tropicalis
JGI 4.1 gw1.168.2.1 X. tropicalis
JGI 4.1 gw1.168.97.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1680097 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1680011 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_168000011 X. tropicalis

mRNAs based on gene models(25)

Source Version Model Species
NCBI 10.0 mRNA083854 X. tropicalis
NCBI 10.1 XBmRNA57726 X. laevis.L
NCBI 10.1 XBmRNA62096 X. laevis.S
ENSEMBL 10.0 ENSXETT00000092547 X. tropicalis
ENSEMBL 10.0 ENSXETT00000104735 X. tropicalis
JGI 9.1 Xelaev18034884m X. laevis.L
JGI 9.1 Xelaev18037140m X. laevis.S
Xenbase 9.1 rna37595 X. tropicalis
Xenbase 9.2 rna82811 X. laevis.L
Xenbase 9.2 rna59689 X. laevis.S
ENSEMBL 9.1 ENSXETT00000104735 X. tropicalis
ENSEMBL 9.1 ENSXETT00000092547 X. tropicalis
JGI 7.1 Xetro.G00795.2 X. tropicalis
JGI 7.1 Xetro.G00795.1 X. tropicalis
JGI 6.0 XeXenL6RMv10008955m X. laevis.L
JGI 4.1 e_gw1.168.2.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000022054 X. tropicalis
ENSEMBL 4.1 ENSXETT00000022059 X. tropicalis
JGI 4.1 ensembl.C_scaffold_168000021 X. tropicalis
JGI 4.1 e_gw1.168.97.1 X. tropicalis
JGI 4.1 gw1.168.2.1 X. tropicalis
JGI 4.1 gw1.168.97.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1680097 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1680011 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_168000011 X. tropicalis

mRNAs from cDNA libraries (4)

Clone Accession Species Library Anatomy Stage
XM_002935764 X. tropicalis
XM_018225419 X. laevis.L
XM_018227603 X. laevis.S
XM_041568847 X. laevis.L

ESTs (47)

Clone Accession 5'/3' Species Library Anatomy Stage
xl290p24 DC120624 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl274h09 DC115967 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:7980179 DR720962 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:7980504 DR716933 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
XL498b10ex BP709507 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL496c20ex BP708928 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL478i07ex BP695786 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL430p04ex BP679132 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL411n22ex BP672792 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL173a24 BJ097038 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL098o23 BJ072548 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL075b01 BJ062117 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL075a01 BJ062097 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL065g08 BJ060307 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL060g20 BJ058760 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL022c05 BJ033549 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL016j04 BJ032403 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL003b24 BJ030092 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:6932628 CB942417 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:6931848 CB941769 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:5571620 BQ735578 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:3549667 BG578511 5' X. laevis.L Wellcome CRC pRN3 St19 26 whole organism NF stage 19 to NF stage 26
IMAGE:3550159 BG577962 5' X. laevis.L Wellcome CRC pRN3 St19 26 whole organism NF stage 19 to NF stage 26
IMAGE:3549975 BG577924 5' X. laevis.L Wellcome CRC pRN3 St19 26 whole organism NF stage 19 to NF stage 26
rxl247f12 DC073470 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl278g17 DC082428 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl290p24 DC085845 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl279g17 DC082682 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl321c08 DC093580 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxlk112p23ex DC006837 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:7980504 DR716884 3' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
XL462g16ex BP725282 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL498b10ex BP741363 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL478i07ex BP729641 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL430p04ex BP716035 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL411n22ex BP710809 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL173a24 BJ100028 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL098o23 BJ089558 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL081k16 BJ082601 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL075b01 BJ080276 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL075a01 BJ080254 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL065g08 BJ078530 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL060g20 BJ077270 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL003b24 BJ045123 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL022c05 BJ048821 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL025k16 BJ049304 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL016j04 BJ047435 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15