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Summary Expression Phenotypes Gene Literature (0) GO Terms (4) Nucleotides (175) Proteins (82) Interactants (0) Wiki
XB-GENEPAGE-6460372

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for pcdhga3 - All

RefSeq mRNAs(36)
Models - Gene (19)
Models - mRNA (19)
mRNAs (46)
ESTs (21)

RefSeq mRNAs (36)

Accession Version name Length Protein Species
NM_001170512 NM_001170512.1 protocadherin gamma subfamily A, 3 precursor 3871 bp NP_001163983 X. tropicalis
XM_041584890 XM_041584890.1 XP_041440824.1 protocadherin gamma subfamily A, 3 L homeolog isoform X3 6618 bp XP_041440824 X. laevis.L
XM_041584916 XM_041584916.1 XP_041440850.1 protocadherin gamma subfamily A, 3 L homeolog isoform X37 6622 bp XP_041440850 X. laevis.L
XM_041584917 XM_041584917.1 XP_041440851.1 protocadherin gamma subfamily A, 3 L homeolog isoform X38 6608 bp XP_041440851 X. laevis.L
XM_041584918 XM_041584918.1 XP_041440852.1 protocadherin gamma subfamily A, 3 L homeolog isoform X39 6605 bp XP_041440852 X. laevis.L
XM_041584919 XM_041584919.1 XP_041440853.1 protocadherin gamma subfamily A, 3 L homeolog isoform X40 6951 bp XP_041440853 X. laevis.L
XM_041584920 XM_041584920.1 XP_041440854.1 protocadherin gamma subfamily A, 3 L homeolog isoform X41 6948 bp XP_041440854 X. laevis.L
XM_041584921 XM_041584921.1 XP_041440855.1 protocadherin gamma subfamily A, 3 L homeolog isoform X42 6648 bp XP_041440855 X. laevis.L
XM_041584922 XM_041584922.1 XP_041440856.1 protocadherin gamma subfamily A, 3 L homeolog isoform X43 6645 bp XP_041440856 X. laevis.L
NM_001086138 NM_001086138.1 protocadherin gamma subfamily A, 3 L homeolog 5997 bp NP_001079607 X. laevis.L
XM_041584907 XM_041584907.1 XP_041440841.1 protocadherin gamma subfamily A, 3 L homeolog isoform X29 6578 bp XP_041440841 X. laevis.L
XM_041584908 XM_041584908.1 XP_041440842.1 protocadherin gamma subfamily A, 3 L homeolog isoform X30 6625 bp XP_041440842 X. laevis.L
XM_041584909 XM_041584909.1 XP_041440843.1 protocadherin gamma subfamily A, 3 L homeolog isoform X31 6623 bp XP_041440843 X. laevis.L
XM_041584911 XM_041584911.1 XP_041440845.1 protocadherin gamma subfamily A, 3 L homeolog isoform X32 6638 bp XP_041440845 X. laevis.L
XM_041584912 XM_041584912.1 XP_041440846.1 protocadherin gamma subfamily A, 3 L homeolog isoform X33 6642 bp XP_041440846 X. laevis.L
XM_041584913 XM_041584913.1 XP_041440847.1 protocadherin gamma subfamily A, 3 L homeolog isoform X34 6919 bp XP_041440847 X. laevis.L
XM_041584914 XM_041584914.1 XP_041440848.1 protocadherin gamma subfamily A, 3 L homeolog isoform X35 6588 bp XP_041440848 X. laevis.L
XM_041584915 XM_041584915.1 XP_041440849.1 protocadherin gamma subfamily A, 3 L homeolog isoform X36 6620 bp XP_041440849 X. laevis.L
XM_041584899 XM_041584899.1 XP_041440833.1 protocadherin gamma subfamily A, 3 L homeolog isoform X14 6682 bp XP_041440833 X. laevis.L
XM_041584900 XM_041584900.1 XP_041440834.1 protocadherin gamma subfamily A, 3 L homeolog isoform X16 6679 bp XP_041440834 X. laevis.L
XM_041584901 XM_041584901.1 XP_041440835.1 protocadherin gamma subfamily A, 3 L homeolog isoform X18 6739 bp XP_041440835 X. laevis.L
XM_041584902 XM_041584902.1 XP_041440836.1 protocadherin gamma subfamily A, 3 L homeolog isoform X22 6913 bp XP_041440836 X. laevis.L
XM_041584903 XM_041584903.1 XP_041440837.1 protocadherin gamma subfamily A, 3 L homeolog isoform X24 6632 bp XP_041440837 X. laevis.L
XM_041584904 XM_041584904.1 XP_041440838.1 protocadherin gamma subfamily A, 3 L homeolog isoform X25 6873 bp XP_041440838 X. laevis.L
XM_041584905 XM_041584905.1 XP_041440839.1 protocadherin gamma subfamily A, 3 L homeolog isoform X27 6922 bp XP_041440839 X. laevis.L
XM_041584906 XM_041584906.1 XP_041440840.1 protocadherin gamma subfamily A, 3 L homeolog isoform X28 6645 bp XP_041440840 X. laevis.L
XM_041584891 XM_041584891.1 XP_041440825.1 protocadherin gamma subfamily A, 3 L homeolog isoform X5 6615 bp XP_041440825 X. laevis.L
XM_041584892 XM_041584892.1 XP_041440826.1 protocadherin gamma subfamily A, 3 L homeolog isoform X7 6709 bp XP_041440826 X. laevis.L
XM_041584893 XM_041584893.1 XP_041440827.1 protocadherin gamma subfamily A, 3 L homeolog isoform X8 6718 bp XP_041440827 X. laevis.L
XM_041584894 XM_041584894.1 XP_041440828.1 protocadherin gamma subfamily A, 3 L homeolog isoform X9 6939 bp XP_041440828 X. laevis.L
XM_041584895 XM_041584895.1 XP_041440829.1 protocadherin gamma subfamily A, 3 L homeolog isoform X10 6884 bp XP_041440829 X. laevis.L
XM_041584896 XM_041584896.1 XP_041440830.1 protocadherin gamma subfamily A, 3 L homeolog isoform X11 6706 bp XP_041440830 X. laevis.L
XM_041584897 XM_041584897.1 XP_041440831.1 protocadherin gamma subfamily A, 3 L homeolog isoform X12 7184 bp XP_041440831 X. laevis.L
XM_041584898 XM_041584898.1 XP_041440832.1 protocadherin gamma subfamily A, 3 L homeolog isoform X13 6936 bp XP_041440832 X. laevis.L
XM_041584888 XM_041584888.1 XP_041440822.1 protocadherin gamma subfamily A, 3 L homeolog isoform X1 6728 bp XP_041440822 X. laevis.L
XM_041584889 XM_041584889.1 XP_041440823.1 protocadherin gamma subfamily A, 3 L homeolog isoform X2 6725 bp XP_041440823 X. laevis.L

Models - Gene (19)

Source Version Model Species
NCBI 10.1 XBXL10_1g12155 X. laevis.L
Xenbase 9.2 gene4186 X. laevis.S
JGI 7.1 Xetro.C01189 X. tropicalis
JGI 9.1 Xelaev18017060m.g X. laevis.L
JGI 9.1 Xelaev18021562m.g X. laevis.S
Xenbase 9.2 gene44995 X. laevis.L
JGI 6.0 XeXenL6RMv10014995m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000024518 X. tropicalis
JGI 4.1 e_gw1.65.22.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_650035 X. tropicalis
JGI 4.1 e_gw1.65.21.1 X. tropicalis
JGI 4.1 e_gw1.65.86.1 X. tropicalis
JGI 4.1 gw1.65.21.1 X. tropicalis
JGI 4.1 gw1.65.22.1 X. tropicalis
JGI 4.1 gw1.65.86.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_650021 X. tropicalis
JGI 4.1 estExt_Genewise1.C_650022 X. tropicalis
JGI 4.1 estExt_Genewise1.C_650086 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_65000073 X. tropicalis

mRNAs based on gene models(19)

Source Version Model Species
NCBI 10.1 XBmRNA22739 X. laevis.L
JGI 9.1 Xelaev18017060m X. laevis.L
JGI 9.1 Xelaev18021562m X. laevis.S
Xenbase 9.2 rna89168 X. laevis.L
Xenbase 9.2 rna12190 X. laevis.S
JGI 7.1 Xetro.C01189.1 X. tropicalis
JGI 6.0 XeXenL6RMv10014995m X. laevis.L
JGI 4.1 e_gw1.65.22.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000005889 X. tropicalis
JGI 4.1 e_gw1.65.21.1 X. tropicalis
JGI 4.1 e_gw1.65.86.1 X. tropicalis
JGI 4.1 gw1.65.21.1 X. tropicalis
JGI 4.1 gw1.65.22.1 X. tropicalis
JGI 4.1 gw1.65.86.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_650035 X. tropicalis
JGI 4.1 estExt_Genewise1.C_650021 X. tropicalis
JGI 4.1 estExt_Genewise1.C_650022 X. tropicalis
JGI 4.1 estExt_Genewise1.C_650086 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_65000073 X. tropicalis

mRNAs from cDNA libraries (46)

Clone Accession Species Library Anatomy Stage
NM_001170512 X. tropicalis
IMAGE:5572441 BC045118 X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
NM_001086138 X. laevis.L
XM_018250648 X. laevis.L
XM_018250647 X. laevis.L
XM_018250646 X. laevis.L
XM_018250645 X. laevis.L
XM_018250643 X. laevis.L
XM_018250642 X. laevis.L
XM_018250641 X. laevis.L
XM_018250638 X. laevis.L
XM_018250637 X. laevis.L
XM_041584922 X. laevis.L
XM_041584921 X. laevis.L
XM_041584920 X. laevis.L
XM_041584919 X. laevis.L
XM_041584918 X. laevis.L
XM_041584917 X. laevis.L
XM_041584916 X. laevis.L
XM_041584915 X. laevis.L
XM_041584914 X. laevis.L
XM_041584913 X. laevis.L
XM_041584912 X. laevis.L
XM_041584911 X. laevis.L
XM_041584909 X. laevis.L
XM_041584908 X. laevis.L
XM_041584907 X. laevis.L
XM_041584906 X. laevis.L
XM_041584905 X. laevis.L
XM_041584904 X. laevis.L
XM_041584903 X. laevis.L
XM_041584902 X. laevis.L
XM_041584901 X. laevis.L
XM_041584900 X. laevis.L
XM_041584899 X. laevis.L
XM_041584898 X. laevis.L
XM_041584897 X. laevis.L
XM_041584896 X. laevis.L
XM_041584895 X. laevis.L
XM_041584894 X. laevis.L
XM_041584893 X. laevis.L
XM_041584892 X. laevis.L
XM_041584891 X. laevis.L
XM_041584890 X. laevis.L
XM_041584889 X. laevis.L
XM_041584888 X. laevis.L

ESTs (21)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8921306 EL835844 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7607706 CX408650 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7641561 CX795508 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
THdA031o09 CR573008 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7607706 CX408649 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7661013 CX841760 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7641561 CX795507 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:8645028 EB731373 5' X. laevis.L NICHD_XGC_skin_m skin unspecified stage
IMAGE:8534462 EB474657 5' X. laevis.L NICHD_XGC_limb_m limb NF stage 54 to NF stage 61
XL100n07 BJ067498 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL082i21 BJ065302 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:6877161 CB205996 5' X. laevis.L NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
IMAGE:5572441 BQ735690 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:4957044 BI447804 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:3580440 BG162266 5' X. laevis.L Wellcome CRC pRN3 head head NF stage 29 and 30
za62e06 AW159229 5' X. laevis.L Xenopus EST library brain NF stage 45 to NF stage 66
za34h09 AW158091 5' X. laevis.L Xenopus EST library brain NF stage 45 to NF stage 66
XL082i21 BJ087747 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:6877161 CB756406 3' X. laevis.L NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
IMAGE:4959112 BI478051 3' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:4957044 BI447500 3' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32