Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (0) GO Terms (1) Nucleotides (181) Proteins (46) Interactants (13) Wiki
XB-GENEPAGE-6458017

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for zc3h4 - All

RefSeq mRNAs(18)
Models - Gene (13)
Models - mRNA (16)
mRNAs (22)
ESTs (85)

RefSeq mRNAs (18)

Accession Version Protein Name Length Protein Species
NM_001127030 NM_001127030.1 zinc finger CCCH domain-containing protein 4 3367 bp NP_001120502 X. tropicalis
XM_012968033 XM_012968033.3 zinc finger CCCH domain-containing protein 4 isoform X1 5507 bp XP_012823487 X. tropicalis
XM_012968034 XM_012968034.3 zinc finger CCCH domain-containing protein 4 isoform X2 4892 bp XP_012823488 X. tropicalis
XM_012968035 XM_012968035.3 zinc finger CCCH domain-containing protein 4 isoform X3 4835 bp XP_012823489 X. tropicalis
XM_012968036 XM_012968036.3 zinc finger CCCH domain-containing protein 4 isoform X4 4615 bp XP_012823490 X. tropicalis
XM_018230813 XM_018230813.2 zinc finger CCCH domain-containing protein 4 isoform X2 4805 bp XP_018086302 X. laevis.L
XM_041572924 XM_041572924.1 XP_041428858.1 zinc finger CCCH domain-containing protein 4 isoform X1 4809 bp XP_041428858 X. laevis.L
XM_041572925 XM_041572925.1 XP_041428859.1 zinc finger CCCH domain-containing protein 4 isoform X3 4809 bp XP_041428859 X. laevis.L
XM_018233283 XM_018233283.2 zinc finger CCCH domain-containing protein 4 isoform X1 5089 bp XP_018088772 X. laevis.S
XM_018233283 zinc finger CCCH domain-containing protein 4 isoform X1 5089 bp XP_018088772 X. laevis.S
XM_018233286 XM_018233286.2 zinc finger CCCH domain-containing protein 4 isoform X2 5036 bp XP_018088775 X. laevis.S
XM_018233286 zinc finger CCCH domain-containing protein 4 isoform X2 5036 bp XP_018088775 X. laevis.S
XM_018233287 XM_018233287.2 zinc finger CCCH domain-containing protein 4 isoform X3 5032 bp XP_018088776 X. laevis.S
XM_018233287 zinc finger CCCH domain-containing protein 4 isoform X3 5032 bp XP_018088776 X. laevis.S
XM_018233288 XM_018233288.2 zinc finger CCCH domain-containing protein 4 isoform X4 5027 bp XP_018088777 X. laevis.S
XM_018233288 zinc finger CCCH domain-containing protein 4 isoform X4 5027 bp XP_018088777 X. laevis.S
XM_018233289 XM_018233289.2 zinc finger CCCH domain-containing protein 4 isoform X5 4974 bp XP_018088778 X. laevis.S
XM_018233289 zinc finger CCCH domain-containing protein 4 isoform X5 4974 bp XP_018088778 X. laevis.S

Models - Gene (13)

Source Version Model Species
NCBI 10.1 XBXL10_1g38329 X. laevis.S
NCBI 10.1 XBXL10_1g35553 X. laevis.L
NCBI 10.0 XBXT10g012107 X. tropicalis
ENSEMBL 10.0 zc3h4 X. tropicalis
Xenbase 9.2 gene46099 X. laevis.L
JGI 9.1 Xelaev18042502m.g X. laevis.S
JGI 9.1 Xelaev18039274m.g X. laevis.L
Xenbase 9.1 gene6560 X. tropicalis
ENSEMBL 9.1 zc3h4 X. tropicalis
JGI 7.1 Xetro.H01072 X. tropicalis
JGI 6.0 XeXenL6RMv10018918m.g X. laevis.L
JGI 4.1 estExt_fgenesh1_pg.C_6480017 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_648000017 X. tropicalis

mRNAs based on gene models(16)

Source Version Model Species
NCBI 10.1 XBmRNA67142 X. laevis.L
NCBI 10.1 XBmRNA72409 X. laevis.S
ENSEMBL 10.0 ENSXETT00000110808 X. tropicalis
ENSEMBL 10.0 ENSXETT00000060275 X. tropicalis
NCBI 10.0 mRNA059997 X. tropicalis
Xenbase 9.2 rna90728 X. laevis.L
JGI 9.1 Xelaev18042502m X. laevis.S
ENSEMBL 9.1 ENSXETT00000060275 X. tropicalis
Xenbase 9.1 rna21176 X. tropicalis
JGI 9.1 Xelaev18039274m X. laevis.L
JGI 7.1 Xetro.H01072.2 X. tropicalis
JGI 7.1 Xetro.H01072.1 X. tropicalis
JGI 7.1 Xetro.H01072.3 X. tropicalis
JGI 6.0 XeXenL6RMv10018918m X. laevis.L
JGI 4.1 estExt_fgenesh1_pg.C_6480017 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_648000017 X. tropicalis

mRNAs from cDNA libraries (22)

Clone Accession Species Library Anatomy Stage
TGas112j10 CU025027 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu136g16 CR848303 X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
XM_012968034 X. tropicalis
XM_012968035 X. tropicalis
XM_012968033 X. tropicalis
NM_001127030 X. tropicalis
IMAGE:7807159 BC168044 X. tropicalis
XM_012968036 X. tropicalis
IMAGE:7688299 BC161391 X. tropicalis NIH_XGC_tropTe4 testis frog
XM_018233283 X. laevis.S
XM_018233283 X. laevis.S
XM_018233287 X. laevis.S
XM_018233287 X. laevis.S
XM_018230813 X. laevis.L
XM_018233289 X. laevis.S
XM_018233289 X. laevis.S
XM_041572924 X. laevis.L
XM_018233286 X. laevis.S
XM_018233286 X. laevis.S
XM_018233288 X. laevis.S
XM_018233288 X. laevis.S
XM_041572925 X. laevis.L

ESTs (85)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7786305 CX327944 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTpA045h08 BX718768 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA010j07 BX703990 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
THdA033a04 CR573471 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TNeu117f19 AL791949 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu136g16 AL789618 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu004j14 AL637001 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:8952939 EG653118 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
IMAGE:7799790 DN061505 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:8887274 EL845118 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8916650 EL830162 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:4440711 BG512123 5' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
IMAGE:4440754 BG513018 5' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
st18j22 DC168154 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:6986267 CF222101 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:7741852 DN033270 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
TGas042g02 AL653543 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas080k13 AL782640 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas112j10 AL962578 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas096k13 AL969528 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7715573 CX975113 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:8859247 EL823186 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8857076 EL820746 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8931860 EL667118 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8937710 EL640961 5' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
IMAGE:7555575 CX502713 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7708913 CX962664 5' X. tropicalis NIH_XGC_tropTe5 testis frog
CAAN11491 CX927378 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7688299 CX910430 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7649024 CX808687 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7016816 CF525278 5' X. tropicalis NICHD_XGC_Swb1 whole organism frog
IMAGE:7584106 CX414946 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7607637 CX368071 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TGas080k13 BX752557 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:4440754 BG486233 3' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
IMAGE:4440711 BG487131 3' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
TGas096k13 BX754589 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas125i03 BX763237 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7534144 CX428466 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7555575 CX502712 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu117f19 BX691378 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
THdA033a04 CR573472 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTpA045h08 BX718769 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7786305 CX327943 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7607637 CX368070 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7584106 CX414945 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7649024 CX808686 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7688299 CX910429 3' X. tropicalis NIH_XGC_tropTe4 testis frog
CAAN11491 CX927377 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7708913 CX962663 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7741852 DN033269 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7799790 DN061504 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:8937710 EL640960 3' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
IMAGE:8931860 EL667117 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8857076 EL820747 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8859247 EL823187 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8916650 EL830163 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:3401337 BE669407 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
xl238g15 DC105228 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:3401335 BE669406 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:7296907 CO385237 5' X. laevis.L Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
IMAGE:3401336 BE669396 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
xlk54j01ex DC033910 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk109e05ex DC038605 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk120b10ex DC042001 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
PBX0130H02 AW643619 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XL512b06ex BP704652 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
xl259d11 DC111523 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL210g11 BJ625055 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
xl254f15 DC110076 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:6864232 CA987555 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
xl239p17 DC105709 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl307b20 DC090253 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:3401336 BE575562 3' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
rxl259d11 DC076804 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxlk109e05ex DC005671 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxl257l20 DC076385 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxlk54j01ex DC001113 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxl239p17 DC071422 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:7296907 CO553952 3' X. laevis.L Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
rxl238g15 DC070970 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:3557388 BG020867 3' X. laevis.L Wellcome CRC pRN3 St13 17 egg animal cap whole organism NF stage 13 to NF stage 21
XL512b06ex BP737437 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:3401335 BE575571 3' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
rxlk120b10ex DC009015 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5