Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (33) GO Terms (1) Nucleotides (253) Proteins (37) Interactants (432) Wiki
XB-GENEPAGE-6457627

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for sdc2 - Xenopus laevis

RefSeq mRNAs(4)
Models - Gene (9)
Models - mRNA (9)
mRNAs (10)
ESTs (42)

RefSeq mRNAs (4)

Accession Version Protein Name Length Protein Species
NM_001087471 NM_001087471.1 syndecan-2-B precursor 1157 bp NP_001080940 X. laevis.S
XM_041567087 XM_041567087.1 XP_041423021.1 syndecan-2-B isoform X1 2866 bp XP_041423021 X. laevis.S
XM_041567088 XM_041567088.1 XP_041423022.1 syndecan-2-B isoform X2 3239 bp XP_041423022 X. laevis.S
NM_001086751 NM_001086751.1 syndecan-2-A precursor 1501 bp NP_001080220 X. laevis.L

Models - Gene (9)

Source Version Model Species
NCBI 10.1 XBXL10_1g28197 X. laevis.L
NCBI 10.1 XBXL10_1g29708 X. laevis.S
JGI 9.1 Xelaev18032236m.g X. laevis.L
JGI 9.1 Xelaev18033900m.g X. laevis.S
Xenbase 9.2 gene12838 X. laevis.L
Xenbase 9.2 gene13181 X. laevis.S
JGI 7.2 Xelaev16066454m.g X. laevis.L
JGI 7.2 Xelaev16045125m.g X. laevis.S
JGI 6.0 XeXenL6RMv10006122m.g X. laevis.L

mRNAs based on gene models(9)

Source Version Model Species
NCBI 10.1 XBmRNA52948 X. laevis.L
NCBI 10.1 XBmRNA55908 X. laevis.S
JGI 9.1 Xelaev18032236m X. laevis.L
JGI 9.1 Xelaev18033900m X. laevis.S
Xenbase 9.2 rna37307 X. laevis.L
Xenbase 9.2 rna38334 X. laevis.S
JGI 7.2 Xelaev16045125m X. laevis.S
JGI 7.2 Xelaev16066454m X. laevis.L
JGI 6.0 XeXenL6RMv10006122m X. laevis.L

mRNAs from cDNA libraries (10)

Clone Accession Species Library Anatomy Stage
IMAGE:7981633 BC106318 X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:4888131 BC041490 X. laevis.L NICHD_XGC_Emb2 whole organism NF stage 17 to NF stage 19
IMAGE:4173970 BC071080 X. laevis.S
S10-55-F11 AF549999 X. laevis.S
U41760 X. laevis.S
XS-2 U24433 X. laevis.L
NM_001087471 X. laevis.S
NM_001086751 X. laevis.L
XM_041567088 X. laevis.S
XM_041567087 X. laevis.S

ESTs (42)

Clone Accession 5'/3' Species Library Anatomy Stage
xl341d08 DC135263 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl254n21 DC110232 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl280a12 DC117558 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl245b10 DC107300 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl263m08 DC112882 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl253n21 DC109930 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl238a07 DC105111 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xlk4j17ex DC054102 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk81f17ex DC061703 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk72m08ex DC058624 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:8543648 EB482098 5' X. laevis.S NICHD_XGC_tail_m tail NF stage 56 to NF stage 62
IMAGE:8528161 EB463477 5' X. laevis.L NICHD_XGC_int_m whole organism NF stage 56 to NF stage 62
IMAGE:8320974 DY544331 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:7981633 DR728070 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:7976438 DR724720 5' X. laevis.L NICHD_XGC_Emb9 whole organism NF stage 17 to NF stage 19
IMAGE:7982130 DR717097 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
XL456k14ex BP688191 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGp998I0414207 BX854704 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
XL065d16 BJ060248 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:5515900 CF285959 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:6940821 CD099632 5' X. laevis.L NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
IMAGE:6936995 CD098601 5' X. laevis.S NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
IMAGE:6881208 CB208390 5' X. laevis.S NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
IMAGE:5155149 CA789714 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6637253 BU911300 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6634636 BU909058 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:3556580 BF612517 5' X. laevis.L Wellcome CRC pRN3 St13 17 egg animal cap whole organism NF stage 13 to NF stage 21
IMAGE:3548062 BF611976 5' X. laevis.S Wellcome CRC pRN3 St19 26 whole organism NF stage 19 to NF stage 26
IMAGE:3377746 BE190020 5' X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:3377744 BE190019 5' X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
rxl341d08 DC099140 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl238a07 DC070855 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxlk72m08ex DC025200 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk81f17ex DC028183 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk4j17ex DC020719 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:7981633 DR728065 3' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:7976438 DR724682 3' X. laevis.L NICHD_XGC_Emb9 whole organism NF stage 17 to NF stage 19
IMAGE:7982130 DR717090 3' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
XL065d16 BJ078470 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:6881208 CB561271 3' X. laevis.S NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
IMAGE:3548062 BF232601 3' X. laevis.S Wellcome CRC pRN3 St19 26 whole organism NF stage 19 to NF stage 26
IMAGE:3377746 BE189314 3' X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage