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Summary Expression Phenotypes Gene Literature (15) GO Terms (9) Nucleotides (258) Proteins (43) Interactants (130) Wiki
XB-GENEPAGE-6258021

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for upf1 - Xenopus laevis

RefSeq mRNAs(2)
Models - Gene (8)
Models - mRNA (8)
mRNAs (3)
ESTs (64)

RefSeq mRNAs (2)

Accession Version name Length Protein Species
NM_001092393 NM_001092393.1 uncharacterized protein LOC444289 5504 bp NP_001085862 X. laevis.S
XM_018254615 XM_018254615.2 regulator of nonsense transcripts 1 5602 bp XP_018110104 X. laevis.L

Models - Gene (8)

Source Version Model Species
NCBI 10.1 XBXL10_1g4368 X. laevis.S
NCBI 10.1 XBXL10_1g1525 X. laevis.L
JGI 9.1 Xelaev18009735m.g X. laevis.S
JGI 9.1 Xelaev18006197m.g X. laevis.L
Xenbase 9.2 gene12327 X. laevis.S
Xenbase 9.2 gene19932 X. laevis.L
JGI 7.2 Xelaev16061757m.g X. laevis.S
JGI 6.0 XeXenL6RMv10004587m.g X. laevis.S

mRNAs based on gene models(8)

Source Version Model Species
NCBI 10.1 XBmRNA2698 X. laevis.L
NCBI 10.1 XBmRNA8123 X. laevis.S
JGI 9.1 Xelaev18006197m X. laevis.L
JGI 9.1 Xelaev18009735m X. laevis.S
Xenbase 9.2 rna58205 X. laevis.L
Xenbase 9.2 rna35833 X. laevis.S
JGI 7.2 Xelaev16061757m X. laevis.S
JGI 6.0 XeXenL6RMv10004587m X. laevis.S

mRNAs from cDNA libraries (3)

Clone Accession Species Library Anatomy Stage
IMAGE:5516183 BC073441 X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
NM_001092393 X. laevis.S
XM_018254615 X. laevis.L

ESTs (64)

Clone Accession 5'/3' Species Library Anatomy Stage
xl303j02 DC124106 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl274g24 DC115960 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xlk141n23ex DC049094 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:8822175 EG574390 5' X. laevis.S NICHD_XGC_int_m whole organism NF stage 56 to NF stage 62
IMAGE:8538068 EB467579 5' X. laevis.S NICHD_XGC_olfb brain unspecified stage
IMAGE:7980487 DR715019 5' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
XL426d05ex BP677220 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL406c14ex BP692975 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL429c23ex BP678220 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL217i15 BJ627265 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL205j22 BJ623690 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL197p01 BJ621574 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL189e21 BJ619456 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL152i05 BJ096054 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL150h17 BJ095531 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL065o22 BJ060490 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL105f08 BJ067956 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL063d08 BJ059626 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL084o10 BJ066019 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL068d02 BJ062500 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL066n21 BJ060800 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL036f22 BJ036435 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL030l22 BJ034748 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL032i18 BJ042701 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL035g19 BJ042353 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:5514582 CF287343 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:5516183 CF286466 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:6862616 CA986357 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6325089 CA973056 5' X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:6323954 CA972275 5' X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:6634029 BU908546 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6630617 BU905717 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:3517191 BG346809 5' X. laevis.S Kirschner embryo St10 14 whole organism NF stage 10 to NF stage 14
IMAGE:3745237 BE680199 5' X. laevis.S Xenopus laevis oocyte non normalized oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
IMAGE:3745333 BE679782 5' X. laevis.S Xenopus laevis oocyte non normalized oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
PBX0120D07 AW642683 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0108C12 AW641612 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0071C07 AW638541 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0071A11 AW638527 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XENOPUS_SOURCE_ID:xlnoc002b19 AW199550 5' X. laevis.S Xenopus laevis oocyte oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
rxl248i23 DC073817 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl303j02 DC089225 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl274g24 DC081032 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxlk141n23ex DC015821 3' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:8822175 EG571965 3' X. laevis.S NICHD_XGC_int_m whole organism NF stage 56 to NF stage 62
XL217i15 BJ643577 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL190d24 BJ636346 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL189e21 BJ636094 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL152i05 BJ100381 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL150h17 BJ099393 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL053e16 BJ086512 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL105f08 BJ085254 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL084o10 BJ083344 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL068d02 BJ080543 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL066n21 BJ079015 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL065o22 BJ078706 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL063d08 BJ078141 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL036f22 BJ051652 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL032i18 BJ056653 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL035g19 BJ056312 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:4783738 BM191891 3' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3745237 BE678761 3' X. laevis.S Xenopus laevis oocyte non normalized oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
PBX0004H06 AW633203 3' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XENOPUS_SOURCE_ID:xlnoc002b19 AW198749 3' X. laevis.S Xenopus laevis oocyte oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)