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Summary Expression Phenotypes Gene Literature (15) GO Terms (9) Nucleotides (258) Proteins (43) Interactants (130) Wiki
XB-GENEPAGE-6258021

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for upf1 - Xenopus tropicalis

RefSeq mRNAs(1)
Models - Gene (18)
Models - mRNA (22)
mRNAs (3)
ESTs (73)

RefSeq mRNAs (1)

Accession Version name Length Protein Species
XM_002938826 XM_002938826.5 regulator of nonsense transcripts 1 5660 bp XP_002938872 X. tropicalis

Models - Gene (18)

Source Version Model Species
NCBI 10.0 XBXT10g013158 X. tropicalis
ENSEMBL 10.0 upf1 X. tropicalis
Xenbase 9.1 gene515 X. tropicalis
ENSEMBL 9.1 upf1 X. tropicalis
JGI 8.0 Xetrov14003510m.g X. tropicalis
JGI 7.1 Xetro.A02320 X. tropicalis
ENSEMBL 4.1 ENSXETG00000013602 X. tropicalis
JGI 4.1 e_gw1.410.14.1 X. tropicalis
JGI 4.1 e_gw1.410.68.1 X. tropicalis
JGI 4.1 e_gw1.410.81.1 X. tropicalis
JGI 4.1 gw1.410.14.1 X. tropicalis
JGI 4.1 gw1.410.68.1 X. tropicalis
JGI 4.1 gw1.410.81.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4100014 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4100068 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4100081 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4100010 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_410000010 X. tropicalis

mRNAs based on gene models(22)

Source Version Model Species
NCBI 10.0 mRNA065111 X. tropicalis
ENSEMBL 10.0 ENSXETT00000061144 X. tropicalis
ENSEMBL 10.0 ENSXETT00000069946 X. tropicalis
Xenbase 9.1 rna1596 X. tropicalis
ENSEMBL 9.1 ENSXETT00000076612 X. tropicalis
ENSEMBL 9.1 ENSXETT00000029819 X. tropicalis
ENSEMBL 9.1 ENSXETT00000061144 X. tropicalis
ENSEMBL 9.1 ENSXETT00000069946 X. tropicalis
JGI 8.0 Xetrov14003510m X. tropicalis
JGI 7.1 Xetro.A02320.1 X. tropicalis
JGI 4.1 ENSXETT00000029819 X. tropicalis
JGI 4.1 e_gw1.410.14.1 X. tropicalis
JGI 4.1 e_gw1.410.68.1 X. tropicalis
JGI 4.1 e_gw1.410.81.1 X. tropicalis
JGI 4.1 gw1.410.14.1 X. tropicalis
JGI 4.1 gw1.410.68.1 X. tropicalis
JGI 4.1 gw1.410.81.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4100014 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4100068 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4100081 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4100010 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_410000010 X. tropicalis

mRNAs from cDNA libraries (3)

Clone Accession Species Library Anatomy Stage
IMAGE:7684219 BC125694 X. tropicalis
IMAGE:7865044 BC157561 X. tropicalis
XM_002938826 X. tropicalis

ESTs (73)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8919481 EL833287 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8915791 EL828652 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8868293 EL707902 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8958151 EL660425 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
IMAGE:8957758 EL654796 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
st30g07 DC172077 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st29g07 DC171494 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st25f12 DC170330 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
XZT3702 CX399235 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
XZT13121 CX321277 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
CAAO6916 CX940045 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7625065 CX402900 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7620706 CX341072 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7593344 CX327322 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7611263 CX378108 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7541342 CX448137 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7853192 DT394211 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7537339 CX445698 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7535235 CX476072 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7711748 CX968583 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7805553 DR841665 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7738587 DN026508 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7737531 DN025061 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7718894 CX981774 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7695155 CX923209 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7687972 CX910837 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7532998 CX434452 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
THdA022h04 CR587469 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA024b07 CR567439 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA008g15 CR562421 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA003m22 CR561839 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
xthr29B22 CN106568 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TTpA020p12 BX731274 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA057e10 BX718113 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TGas040b06 AL651333 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu110k13 AL798799 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu122d21 AL792618 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu144p12 AL790022 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu113e06 AL787643 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu049b07 AL662193 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu043n02 AL658383 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu029i06 AL650518 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:5307540 BQ388992 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:8915791 EL828653 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8925967 EL672087 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8868293 EL707901 3' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
rst30g07 DC141773 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst29g07 DC141328 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
XZT3702 CX399234 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
XZT13121 CX321276 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
CAAO6916 CX940044 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7853192 DT394210 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7687972 CX910836 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7805553 DR841664 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7738587 DN026507 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7718894 CX981773 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7711748 CX968582 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7695155 CX923208 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7535235 CX476071 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7541342 CX448136 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7537339 CX445697 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7532998 CX434451 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7625065 CX402899 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7611263 CX378107 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7620706 CX341071 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7593344 CX327321 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
THdA022h04 CR587470 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
xthr29B22 CN106567 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TGas137n04 BX757628 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu122d21 BX702339 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu113g08 BX701157 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu110k13 BX694634 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:5307540 BQ388991 3' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13