Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (10) GO Terms (4) Nucleotides (78) Proteins (44) Interactants (419) Wiki
XB-GENEPAGE-6085250

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for atf3 - All

RefSeq mRNAs(5)
Models - Gene (32)
Models - mRNA (32)
mRNAs (6)
ESTs (2)

RefSeq mRNAs (5)

Accession Version Protein Name Length Protein Species
XM_002934698 XM_002934698.5 cyclic AMP-dependent transcription factor ATF-3 1804 bp XP_002934744 X. tropicalis
NM_001094018 NM_001094018.1 activating transcription factor 3 L homeolog 3170 bp NP_001087487 X. laevis.L
XM_041562233 XM_041562233.1 XP_041418167.1 activating transcription factor 3 L homeolog isoform X1 1211 bp XP_041418167 X. laevis.L
XM_041564261 XM_041564261.1 XP_041420195.1 cyclic AMP-dependent transcription factor ATF-3 isoform X1 1741 bp XP_041420195 X. laevis.S
XM_018265004 XM_018265004.2 cyclic AMP-dependent transcription factor ATF-3 isoform X2 2482 bp XP_018120493 X. laevis.S

Models - Gene (32)

Source Version Model Species
NCBI 10.0 XBXT10g002942 X. tropicalis
NCBI 10.1 XBXL10_1g22612 X. laevis.L
NCBI 10.1 XBXL10_1g24983 X. laevis.S
ENSEMBL 10.0 atf3 X. tropicalis
JGI 9.1 Xelaev18026209m.g X. laevis.L
JGI 9.1 Xelaev18028696m.g X. laevis.S
Xenbase 9.1 gene27962 X. tropicalis
Xenbase 9.2 gene14557 X. laevis.L
Xenbase 9.2 gene3961 X. laevis.S
JGI 8.0 Xetrov14024417m.g X. tropicalis
JGI 7.1 Xetro.E01541 X. tropicalis
JGI 7.2 Xelaev16000770m.g X. laevis.L
JGI 6.0 XeXenL6RMv10009471m.g X. laevis.L
JGI 6.0 XeXenL6RMv10034553m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000014375 X. tropicalis
JGI 4.1 e_gw1.108.189.1 X. tropicalis
JGI 4.1 e_gw1.108.20.1 X. tropicalis
JGI 4.1 e_gw1.108.244.1 X. tropicalis
JGI 4.1 gw1.108.189.1 X. tropicalis
JGI 4.1 gw1.108.20.1 X. tropicalis
JGI 4.1 gw1.108.244.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1080020 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1080186 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1080241 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1080012 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1080045 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1080046 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1080014 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_108000012 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_108000045 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_108000046 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_108000014 X. tropicalis

mRNAs based on gene models(32)

Source Version Model Species
NCBI 10.0 mRNA014946 X. tropicalis
NCBI 10.1 XBmRNA42144 X. laevis.L
NCBI 10.1 XBmRNA46605 X. laevis.S
ENSEMBL 10.0 ENSXETT00000110652 X. tropicalis
JGI 9.1 Xelaev18026209m X. laevis.L
JGI 9.1 Xelaev18028696m X. laevis.S
Xenbase 9.1 rna54285 X. tropicalis
Xenbase 9.2 rna42387 X. laevis.L
Xenbase 9.2 rna11533 X. laevis.S
JGI 8.0 Xetrov14024417m X. tropicalis
JGI 7.1 Xetro.E01541.1 X. tropicalis
JGI 7.2 Xelaev16000770m X. laevis.L
JGI 6.0 XeXenL6RMv10009471m X. laevis.L
JGI 6.0 XeXenL6RMv10034553m X. laevis.L
JGI 4.1 ENSXETT00000031433 X. tropicalis
JGI 4.1 e_gw1.108.189.1 X. tropicalis
JGI 4.1 e_gw1.108.20.1 X. tropicalis
JGI 4.1 e_gw1.108.244.1 X. tropicalis
JGI 4.1 gw1.108.189.1 X. tropicalis
JGI 4.1 gw1.108.20.1 X. tropicalis
JGI 4.1 gw1.108.244.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1080020 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1080186 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1080241 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1080012 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1080045 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1080046 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1080014 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_108000012 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_108000045 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_108000046 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_108000014 X. tropicalis

mRNAs from cDNA libraries (6)

Clone Accession Species Library Anatomy Stage
XM_002934698 X. tropicalis
IMAGE:7007938 BC080002 X. laevis.L
NM_001094018 X. laevis.L
XM_018265004 X. laevis.S
XM_041564261 X. laevis.S
XM_041562233 X. laevis.L

ESTs (2)

Clone Accession 5'/3' Species Library Anatomy Stage
XL434g18ex BP680297 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL176n20 BJ616435 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5