Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (1) GO Terms (10) Nucleotides (78) Proteins (27) Interactants (122) Wiki
XB-GENEPAGE-6049003

Show:     All X. tropicalis X. laevis

Nucleotide sequences for arhgap39 - All

RefSeq mRNAs(7)
Models - Gene (12)
Models - mRNA (15)
mRNAs (7)
ESTs (37)

RefSeq mRNAs (7)

Accession Version Protein Name Length Protein Species
XM_031904022 XM_031904022.1 XP_031759882.1 rho GTPase-activating protein 39 isoform X1 3403 bp XP_031759882 X. tropicalis
XM_031904023 XM_031904023.1 XP_031759883.1 rho GTPase-activating protein 39 isoform X2 3310 bp XP_031759883 X. tropicalis
XM_041566703 XM_041566703.1 XP_041422637.1 rho GTPase-activating protein 39 isoform X1 3679 bp XP_041422637 X. laevis.L
XM_041566704 XM_041566704.1 XP_041422638.1 rho GTPase-activating protein 39 isoform X2 3755 bp XP_041422638 X. laevis.L
XM_041566705 XM_041566705.1 XP_041422639.1 rho GTPase-activating protein 39 isoform X3 3586 bp XP_041422639 X. laevis.L
XM_041568231 XM_041568231.1 XP_041424165.1 rho GTPase-activating protein 39 isoform X1 5596 bp XP_041424165 X. laevis.S
XM_041568232 XM_041568232.1 XP_041424166.1 rho GTPase-activating protein 39 isoform X2 5501 bp XP_041424166 X. laevis.S

Models - Gene (12)

Source Version Model Species
NCBI 10.1 XBXL10_1g28431 X. laevis.L
NCBI 10.0 XBXT10g018507 X. tropicalis
NCBI 10.1 XBXL10_1g29919 X. laevis.S
ENSEMBL 10.0 arhgap39 X. tropicalis
Xenbase 9.1 gene15953 X. tropicalis
ENSEMBL 9.1 gpr180 X. tropicalis
JGI 7.1 Xetro.J00216 X. tropicalis
JGI 6.0 XeXenL6RMv10005035m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000007442 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_380127 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_38000130 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_380103 X. tropicalis

mRNAs based on gene models(15)

Source Version Model Species
NCBI 10.1 XBmRNA53403 X. laevis.L
NCBI 10.1 XBmRNA56323 X. laevis.S
ENSEMBL 10.0 ENSXETT00000082142 X. tropicalis
NCBI 10.0 mRNA091382 X. tropicalis
ENSEMBL 10.0 ENSXETT00000116780 X. tropicalis
Xenbase 9.1 rna35292 X. tropicalis
ENSEMBL 9.1 ENSXETT00000082142 X. tropicalis
JGI 7.1 Xetro.J00216.2 X. tropicalis
JGI 7.1 Xetro.J00216.1 X. tropicalis
JGI 6.0 XeXenL6RMv10005035m X. laevis.L
JGI 4.1 fgenesh1_pg.C_scaffold_38000130 X. tropicalis
ENSEMBL 4.1 ENSXETT00000016210 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_380127 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_380103 X. tropicalis
ENSEMBL 4.1 ENSXETT00000016205 X. tropicalis

mRNAs from cDNA libraries (7)

Clone Accession Species Library Anatomy Stage
XM_031904022 X. tropicalis
XM_031904023 X. tropicalis
XM_041566703 X. laevis.L
XM_041566704 X. laevis.L
XM_041566705 X. laevis.L
XM_041568231 X. laevis.S
XM_041568232 X. laevis.S

ESTs (37)

Clone Accession 5'/3' Species Library Anatomy Stage
TTbA024i09 CR418440 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TNeu104i04 AL788613 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TTpA033c03 BX745028 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA010c04 BX708691 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7565557 CX482092 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTpA029f08 BX744520 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7549318 CX484365 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu029g20 AL650514 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu077c21 AL779969 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu077c21 BX685259 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TTpA029f08 BX744521 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA033c01 BX745027 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu104i04 BX691744 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TTpA033c03 BX745029 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7565557 CX482091 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7549318 CX484364 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:6874669 CB199635 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:7975768 DR726216 5' X. laevis.L NICHD_XGC_Emb9 whole organism NF stage 17 to NF stage 19
IMAGE:7977388 DR726967 5' X. laevis.L NICHD_XGC_Emb9 whole organism NF stage 17 to NF stage 19
XL180i16 BJ617388 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL180n10 BJ617470 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
xlk128h02ex DC044743 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:3201034 AW767533 5' X. laevis.L Harland stage 19-23 whole organism NF stage 19 to NF stage 23
IMAGE:4681573 BQ886020 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:8532321 EB464384 5' X. laevis.L NICHD_XGC_limb_m limb NF stage 54 to NF stage 61
XL069i05 BJ062914 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL083i24 BJ065606 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL084i17 BJ065910 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:8532321 EC276945 3' X. laevis.L NICHD_XGC_limb_m limb NF stage 54 to NF stage 61
XL083i24 BJ082940 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL084i17 BJ083232 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:7975768 DR726127 3' X. laevis.L NICHD_XGC_Emb9 whole organism NF stage 17 to NF stage 19
XL069i05 BJ080846 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
rxlk128h02ex DC011592 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL180n10 BJ633947 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL180i16 BJ633874 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL076j02 BJ081709 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25