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Summary Expression Phenotypes Gene Literature (1) GO Terms (12) Nucleotides (95) Proteins (44) Interactants (39) Wiki
XB-GENEPAGE-6046088

Show:     All X. tropicalis X. laevis

Nucleotide sequences for vars2 - All

RefSeq mRNAs(3)
Models - Gene (22)
Models - mRNA (32)
mRNAs (3)
ESTs (19)

RefSeq mRNAs (3)

Accession Version Protein Name Length Protein Species
XM_002940950 XM_002940950.5 valine--tRNA ligase, mitochondrial 3403 bp XP_002940996 X. tropicalis
XM_004917033 XM_004917033.4 valine--tRNA ligase, mitochondrial 3406 bp XP_004917090 X. tropicalis
XM_018230185 XM_018230185.2 valine--tRNA ligase, mitochondrial 4632 bp XP_018085674 X. laevis.L

Models - Gene (22)

Source Version Model Species
NCBI 10.1 XBXL10_1g35530 X. laevis.L
NCBI 10.0 XBXT10g005661 X. tropicalis
ENSEMBL 10.0 vars2 X. tropicalis
Xenbase 9.2 gene17417 X. laevis.L
JGI 9.1 Xelaev18039244m.g X. laevis.L
Xenbase 9.1 gene6803 X. tropicalis
ENSEMBL 9.1 vars2 X. tropicalis
JGI 7.1 Xetro.H01093 X. tropicalis
JGI 6.0 XeXenL6RMv10045804m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000003036 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_6870010 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_687000010 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6870029 X. tropicalis
JGI 4.1 e_gw1.687.2.1 X. tropicalis
JGI 4.1 e_gw1.687.29.1 X. tropicalis
JGI 4.1 gw1.687.2.1 X. tropicalis
JGI 4.1 gw1.687.28.1 X. tropicalis
JGI 4.1 gw1.687.29.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_6870002 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6870002 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6870028 X. tropicalis
JGI 4.1 e_gw1.687.28.1 X. tropicalis

mRNAs based on gene models(32)

Source Version Model Species
NCBI 10.1 XBmRNA67092 X. laevis.L
ENSEMBL 10.0 ENSXETT00000006596 X. tropicalis
NCBI 10.0 mRNA028039 X. tropicalis
Xenbase 9.2 rna50864 X. laevis.L
ENSEMBL 9.1 ENSXETT00000083528 X. tropicalis
ENSEMBL 9.1 ENSXETT00000089226 X. tropicalis
ENSEMBL 9.1 ENSXETT00000093339 X. tropicalis
ENSEMBL 9.1 ENSXETT00000095142 X. tropicalis
ENSEMBL 9.1 ENSXETT00000006596 X. tropicalis
Xenbase 9.1 rna21966 X. tropicalis
ENSEMBL 9.1 ENSXETT00000077665 X. tropicalis
ENSEMBL 9.1 ENSXETT00000102929 X. tropicalis
ENSEMBL 9.1 ENSXETT00000071852 X. tropicalis
ENSEMBL 9.1 ENSXETT00000068058 X. tropicalis
JGI 9.1 Xelaev18039244m X. laevis.L
JGI 7.1 Xetro.H01093.1 X. tropicalis
JGI 6.0 XeXenL6RMv10045804m X. laevis.L
JGI 4.1 estExt_fgenesh1_pg.C_6870010 X. tropicalis
JGI 4.1 e_gw1.687.28.1 X. tropicalis
JGI 4.1 e_gw1.687.29.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000006593 X. tropicalis
ENSEMBL 4.1 ENSXETT00000006596 X. tropicalis
ENSEMBL 4.1 ENSXETT00000006597 X. tropicalis
JGI 4.1 e_gw1.687.2.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_6870002 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6870002 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6870028 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6870029 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_687000010 X. tropicalis
JGI 4.1 gw1.687.2.1 X. tropicalis
JGI 4.1 gw1.687.28.1 X. tropicalis
JGI 4.1 gw1.687.29.1 X. tropicalis

mRNAs from cDNA libraries (3)

Clone Accession Species Library Anatomy Stage
XM_002940950 X. tropicalis
XM_004917033 X. tropicalis
XM_018230185 X. laevis.L

ESTs (19)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7694187 CX921707 5' X. tropicalis NIH_XGC_tropTe4 testis frog
TTpA005d23 BX707281 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA043n15 BX737625 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7602600 DR893164 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7655624 CX826006 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7660960 CX842075 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7668718 CX856242 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7692321 CX918188 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7693764 CX921401 5' X. tropicalis NIH_XGC_tropTe4 testis frog
TTpA005b23 BX707262 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA064i07 BX729588 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA005d23 BX707282 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7656950 CX828714 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7692321 CX918187 3' X. tropicalis NIH_XGC_tropTe4 testis frog
TTpA043n15 BX737626 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7602600 CX393791 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7668718 CX856241 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7655624 CX826005 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7694187 CX921706 3' X. tropicalis NIH_XGC_tropTe4 testis frog