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Summary Expression Phenotypes Gene Literature (0) GO Terms (5) Nucleotides (178) Proteins (64) Interactants (12) Wiki
XB-GENEPAGE-6045505

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for capn13 - Xenopus tropicalis

RefSeq mRNAs(1)
Models - Gene (28)
Models - mRNA (36)
mRNAs (3)
ESTs (33)

RefSeq mRNAs (1)

Accession Version name Length Protein Species
NM_001008024 NM_001008024.2 calpain-13 3082 bp NP_001008025 X. tropicalis

Models - Gene (28)

Source Version Model Species
NCBI 10.0 XBXT10g016988 X. tropicalis
ENSEMBL 10.0 capn13 X. tropicalis
Xenbase 9.1 gene1143 X. tropicalis
ENSEMBL 9.1 capn13 X. tropicalis
JGI 7.1 Xetro.E01659 X. tropicalis
ENSEMBL 4.1 ENSXETG00000022056 X. tropicalis
JGI 4.1 e_gw1.413.184.1 X. tropicalis
JGI 4.1 e_gw1.413.12.1 X. tropicalis
JGI 4.1 e_gw1.413.179.1 X. tropicalis
JGI 4.1 e_gw1.413.183.1 X. tropicalis
JGI 4.1 e_gw1.413.4.1 X. tropicalis
JGI 4.1 gw1.413.12.1 X. tropicalis
JGI 4.1 gw1.413.179.1 X. tropicalis
JGI 4.1 gw1.413.4.1 X. tropicalis
JGI 4.1 gw1.413.183.1 X. tropicalis
JGI 4.1 gw1.413.184.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_4130021 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4130183 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4130184 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_4130003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4130022 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4130023 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_4130005 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_413000001 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_413000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_413000022 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_413000023 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_413000005 X. tropicalis

mRNAs based on gene models(36)

Source Version Model Species
NCBI 10.0 mRNA084158 X. tropicalis
ENSEMBL 10.0 ENSXETT00000047741 X. tropicalis
ENSEMBL 10.0 ENSXETT00000076966 X. tropicalis
ENSEMBL 10.0 ENSXETT00000091120 X. tropicalis
ENSEMBL 10.0 ENSXETT00000079256 X. tropicalis
Xenbase 9.1 rna3669 X. tropicalis
ENSEMBL 9.1 ENSXETT00000091120 X. tropicalis
ENSEMBL 9.1 ENSXETT00000076966 X. tropicalis
ENSEMBL 9.1 ENSXETT00000079256 X. tropicalis
ENSEMBL 9.1 ENSXETT00000047741 X. tropicalis
JGI 7.1 Xetro.E01659.1 X. tropicalis
JGI 4.1 e_gw1.413.184.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000054932 X. tropicalis
ENSEMBL 4.1 ENSXETT00000047744 X. tropicalis
ENSEMBL 4.1 ENSXETT00000047741 X. tropicalis
JGI 4.1 e_gw1.413.12.1 X. tropicalis
JGI 4.1 e_gw1.413.179.1 X. tropicalis
JGI 4.1 e_gw1.413.183.1 X. tropicalis
JGI 4.1 e_gw1.413.4.1 X. tropicalis
JGI 4.1 gw1.413.12.1 X. tropicalis
JGI 4.1 gw1.413.179.1 X. tropicalis
JGI 4.1 gw1.413.4.1 X. tropicalis
JGI 4.1 gw1.413.183.1 X. tropicalis
JGI 4.1 gw1.413.184.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_4130021 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4130183 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4130184 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_4130003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4130022 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4130023 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_4130005 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_413000001 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_413000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_413000022 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_413000023 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_413000005 X. tropicalis

mRNAs from cDNA libraries (3)

Clone Accession Species Library Anatomy Stage
NM_001008024 X. tropicalis
TNeu133h08 CR926209 X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:6977508 BC080904 X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27

ESTs (33)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8891684 EL865099 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8951715 EL658907 5' X. tropicalis NICHD_XGC_tropInt_60 intestine frog
st7d13 DC175073 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st4n11 DC174366 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st11f10 DC165981 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:8944314 EG650906 5' X. tropicalis NICHD_XGC_tropInt_54 intestine frog
CABC9503 DR840760 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7639793 CX385628 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7721232 CX996443 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7719854 CX983858 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7530320 CX419498 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
THdA003l04 CR560359 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA066m12 CR449609 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA037k16 CR419211 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA013f24 CR412518 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA013f18 CR412515 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTpA038h14 BX715497 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu138p11 AL796890 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu133h08 AL789280 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:6994859 CF239818 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:6977508 CF224534 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
TNeu144m04 AL789666 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:8891684 EL865100 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
rst4n11 DC144040 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst7d13 DC144745 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst11f10 DC135913 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
CABC9503 DR840759 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7721232 CX996442 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7719854 CX983857 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7639793 CX385627 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
THdA003l04 CR560360 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA037k16 CR419212 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:6977508 CF224533 3' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27