Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (0) GO Terms (2) Nucleotides (118) Proteins (67) Interactants (16) Wiki
XB-GENEPAGE-6044443

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for tnrc6c - All

RefSeq mRNAs(9)
Models - Gene (30)
Models - mRNA (45)
mRNAs (11)
ESTs (8)

RefSeq mRNAs (9)

Accession Version name Length Protein Species
XM_041576973 XM_041576973.1 XP_041432907.1 trinucleotide repeat-containing gene 6C protein isoform X1 8358 bp XP_041432907 X. laevis.L
XM_041576974 XM_041576974.1 XP_041432908.1 trinucleotide repeat-containing gene 6C protein isoform X2 8336 bp XP_041432908 X. laevis.L
XM_041578849 XM_041578849.1 XP_041434783.1 trinucleotide repeat-containing gene 6C protein isoform X1 7659 bp XP_041434783 X. laevis.S
XM_041578850 XM_041578850.1 XP_041434784.1 trinucleotide repeat-containing gene 6C protein isoform X2 7636 bp XP_041434784 X. laevis.S
XM_041578851 XM_041578851.1 XP_041434785.1 trinucleotide repeat-containing gene 6C protein isoform X3 7546 bp XP_041434785 X. laevis.S
XM_041578852 XM_041578852.1 XP_041434786.1 trinucleotide repeat-containing gene 6C protein isoform X4 7483 bp XP_041434786 X. laevis.S
XM_041578853 XM_041578853.1 XP_041434787.1 trinucleotide repeat-containing gene 6C protein isoform X5 7448 bp XP_041434787 X. laevis.S
XM_041578854 XM_041578854.1 XP_041434788.1 trinucleotide repeat-containing gene 6C protein isoform X6 6935 bp XP_041434788 X. laevis.S
XM_041578855 XM_041578855.1 XP_041434789.1 trinucleotide repeat-containing gene 6C protein isoform X7 6711 bp XP_041434789 X. laevis.S

Models - Gene (30)

Source Version Model Species
NCBI 10.0 XBXT10g010341 X. tropicalis
NCBI 10.1 XBXL10_1g43116 X. laevis.S
NCBI 10.1 XBXL10_1g40129 X. laevis.L
ENSEMBL 10.0 tnrc6c X. tropicalis
JGI 9.1 Xelaev18046748m.g X. laevis.S
JGI 9.1 Xelaev18044114m.g X. laevis.L
Xenbase 9.1 gene20750 X. tropicalis
Xenbase 9.2 gene17881 X. laevis.S
Xenbase 9.2 gene1640 X. laevis.L
ENSEMBL 9.1 tnrc6c X. tropicalis
JGI 7.1 Xetro.J00083 X. tropicalis
JGI 6.0 XeXenL6RMv10036677m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000019470 X. tropicalis
JGI 4.1 e_gw1.178.143.1 X. tropicalis
JGI 4.1 e_gw1.178.142.1 X. tropicalis
JGI 4.1 e_gw1.178.303.1 X. tropicalis
JGI 4.1 e_gw1.178.354.1 X. tropicalis
JGI 4.1 gw1.178.143.1 X. tropicalis
JGI 4.1 gw1.178.303.1 X. tropicalis
JGI 4.1 gw1.178.354.1 X. tropicalis
JGI 4.1 gw1.178.142.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1780041 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1780142 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1780143 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1780303 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1780354 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1780063 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1780019 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_178000063 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_178000019 X. tropicalis

mRNAs based on gene models(45)

Source Version Model Species
NCBI 10.0 mRNA051173 X. tropicalis
NCBI 10.1 XBmRNA75501 X. laevis.L
NCBI 10.1 XBmRNA81058 X. laevis.S
ENSEMBL 10.0 ENSXETT00000070114 X. tropicalis
ENSEMBL 10.0 ENSXETT00000072284 X. tropicalis
ENSEMBL 10.0 ENSXETT00000102057 X. tropicalis
ENSEMBL 10.0 ENSXETT00000103044 X. tropicalis
JGI 9.1 Xelaev18044114m X. laevis.L
JGI 9.1 Xelaev18046748m X. laevis.S
Xenbase 9.1 rna42755 X. tropicalis
Xenbase 9.2 rna4789 X. laevis.L
Xenbase 9.2 rna52261 X. laevis.S
ENSEMBL 9.1 ENSXETT00000042195 X. tropicalis
ENSEMBL 9.1 ENSXETT00000102989 X. tropicalis
ENSEMBL 9.1 ENSXETT00000070114 X. tropicalis
ENSEMBL 9.1 ENSXETT00000072284 X. tropicalis
ENSEMBL 9.1 ENSXETT00000103875 X. tropicalis
ENSEMBL 9.1 ENSXETT00000103044 X. tropicalis
ENSEMBL 9.1 ENSXETT00000102057 X. tropicalis
ENSEMBL 9.1 ENSXETT00000095059 X. tropicalis
JGI 7.1 Xetro.J00083.1 X. tropicalis
JGI 6.0 XeXenL6RMv10036677m X. laevis.S
JGI 4.1 e_gw1.178.143.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000042192 X. tropicalis
ENSEMBL 4.1 ENSXETT00000042195 X. tropicalis
ENSEMBL 4.1 ENSXETT00000037669 X. tropicalis
ENSEMBL 4.1 ENSXETT00000054044 X. tropicalis
ENSEMBL 4.1 ENSXETT00000042202 X. tropicalis
ENSEMBL 4.1 ENSXETT00000037671 X. tropicalis
JGI 4.1 e_gw1.178.142.1 X. tropicalis
JGI 4.1 e_gw1.178.303.1 X. tropicalis
JGI 4.1 e_gw1.178.354.1 X. tropicalis
JGI 4.1 gw1.178.143.1 X. tropicalis
JGI 4.1 gw1.178.303.1 X. tropicalis
JGI 4.1 gw1.178.354.1 X. tropicalis
JGI 4.1 gw1.178.142.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1780041 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1780142 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1780143 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1780303 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1780354 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1780063 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1780019 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_178000063 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_178000019 X. tropicalis

mRNAs from cDNA libraries (11)

Clone Accession Species Library Anatomy Stage
XM_031894616 X. tropicalis
XM_031894615 X. tropicalis
XM_041578855 X. laevis.S
XM_041578854 X. laevis.S
XM_041578853 X. laevis.S
XM_041578852 X. laevis.S
XM_041578851 X. laevis.S
XM_041578850 X. laevis.S
XM_041578849 X. laevis.S
XM_041576974 X. laevis.L
XM_041576973 X. laevis.L

ESTs (8)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7688572 CX911384 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7648249 CX807291 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7647712 CX806870 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7647591 CX805675 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7646573 CX804223 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7647712 CX806869 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7647591 CX805674 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7299219 CO389881 5' X. laevis.S Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9