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Summary Expression Phenotypes Gene Literature (0) GO Terms (3) Nucleotides (118) Proteins (56) Interactants (8) Wiki
XB-GENEPAGE-6041226

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for tyw5 - All

RefSeq mRNAs(6)
Models - Gene (27)
Models - mRNA (33)
mRNAs (14)
ESTs (16)

RefSeq mRNAs (6)

Accession Version name Length Protein Species
XM_041577095 XM_041577095.1 XP_041433029.1 tRNA wybutosine-synthesizing protein 5 isoform X5 1733 bp XP_041433029 X. laevis.L
XM_041577090 XM_041577090.1 XP_041433024.1 tRNA wybutosine-synthesizing protein 5 isoform X1 1873 bp XP_041433024 X. laevis.L
XM_041577091 XM_041577091.1 XP_041433025.1 tRNA wybutosine-synthesizing protein 5 isoform X3 1898 bp XP_041433025 X. laevis.L
XM_041577092 XM_041577092.1 XP_041433026.1 tRNA wybutosine-synthesizing protein 5 isoform X3 1885 bp XP_041433026 X. laevis.L
XM_041577093 XM_041577093.1 XP_041433027.1 tRNA wybutosine-synthesizing protein 5 isoform X3 2033 bp XP_041433027 X. laevis.L
XM_041577094 XM_041577094.1 XP_041433028.1 tRNA wybutosine-synthesizing protein 5 isoform X3 2082 bp XP_041433028 X. laevis.L

Models - Gene (27)

Source Version Model Species
NCBI 10.0 XBXT10g017820 X. tropicalis
NCBI 10.1 XBXL10_1g40876 X. laevis.L
ENSEMBL 10.0 tyw5 X. tropicalis
JGI 9.1 Xelaev18044926m.g X. laevis.L
Xenbase 9.1 gene6152 X. tropicalis
Xenbase 9.2 gene3129 X. laevis.L
ENSEMBL 9.1 tyw5 X. tropicalis
JGI 7.1 Xetro.I00492 X. tropicalis
JGI 6.0 XeXenL6RMv10042743m.g X. laevis.L
JGI 4.1 estExt_fgenesh1_kg.C_3120004 X. tropicalis
JGI 4.1 e_gw1.312.46.1 X. tropicalis
JGI 4.1 e_gw1.312.5.1 X. tropicalis
JGI 4.1 e_gw1.312.58.1 X. tropicalis
JGI 4.1 gw1.312.46.1 X. tropicalis
JGI 4.1 gw1.312.5.1 X. tropicalis
JGI 4.1 gw1.312.58.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3120016 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3120005 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3120046 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3120058 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3120027 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3120028 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_3120008 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_312000006 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_312000028 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_312000029 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_312000008 X. tropicalis

mRNAs based on gene models(33)

Source Version Model Species
NCBI 10.0 mRNA087915 X. tropicalis
NCBI 10.1 XBmRNA77110 X. laevis.L
ENSEMBL 10.0 ENSXETT00000117893 X. tropicalis
ENSEMBL 10.0 ENSXETT00000093437 X. tropicalis
ENSEMBL 10.0 ENSXETT00000060569 X. tropicalis
ENSEMBL 10.0 ENSXETT00000122394 X. tropicalis
JGI 9.1 Xelaev18044926m X. laevis.L
Xenbase 9.1 rna19860 X. tropicalis
Xenbase 9.2 rna9070 X. laevis.L
ENSEMBL 9.1 ENSXETT00000060569 X. tropicalis
ENSEMBL 9.1 ENSXETT00000093437 X. tropicalis
JGI 7.1 Xetro.I00492.2 X. tropicalis
JGI 7.1 Xetro.I00492.1 X. tropicalis
JGI 7.1 Xetro.I00492.3 X. tropicalis
JGI 6.0 XeXenL6RMv10042743m X. laevis.L
JGI 4.1 estExt_fgenesh1_kg.C_3120004 X. tropicalis
JGI 4.1 e_gw1.312.46.1 X. tropicalis
JGI 4.1 e_gw1.312.5.1 X. tropicalis
JGI 4.1 e_gw1.312.58.1 X. tropicalis
JGI 4.1 gw1.312.46.1 X. tropicalis
JGI 4.1 gw1.312.5.1 X. tropicalis
JGI 4.1 gw1.312.58.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3120016 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3120005 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3120046 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3120058 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3120027 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3120028 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_3120008 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_312000006 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_312000028 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_312000029 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_312000008 X. tropicalis

mRNAs from cDNA libraries (14)

Clone Accession Species Library Anatomy Stage
XM_002937712 X. tropicalis
XM_018097474 X. tropicalis
XM_004917763 X. tropicalis
XM_004917762 X. tropicalis
XM_018236147 X. laevis.L
XM_018236146 X. laevis.L
XM_018236145 X. laevis.L
XM_018236144 X. laevis.L
XM_041577095 X. laevis.L
XM_041577094 X. laevis.L
XM_041577093 X. laevis.L
XM_041577092 X. laevis.L
XM_041577091 X. laevis.L
XM_041577090 X. laevis.L

ESTs (16)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8888049 EL845787 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7602342 CX393692 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
THdA038p14 CR573465 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TGas036f12 AL651726 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu130l11 AL802814 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7027995 CF781108 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
IMAGE:8888049 EL845788 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7602342 CX393691 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
THdA038p14 CR573466 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TNeu130l11 BX700575 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
xl329n13 DC132000 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xlk101d11ex DC036014 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL059l06 BJ058540 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
rxlk101d11ex DC003147 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL180h09 BJ633853 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL059l06 BJ077044 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25