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Summary Expression Phenotypes Gene Literature (0) GO Terms (26) Nucleotides (112) Proteins (44) Interactants (22) Wiki
XB-GENEPAGE-6040242

Show:     All X. tropicalis X. laevis

Nucleotide sequences for tpgs1 - All

RefSeq mRNAs(4)
Models - Gene (32)
Models - mRNA (32)
mRNAs (4)
ESTs (25)

RefSeq mRNAs (4)

Accession Version Protein Name Length Protein Species
XM_002939764 XM_002939764.5 tubulin polyglutamylase complex subunit 1 2193 bp XP_002939810 X. tropicalis
XM_018243692 XM_018243692.2 tubulin polyglutamylase complex subunit 1 isoform X2 1481 bp XP_018099181 X. laevis.S
XM_041579941 XM_041579941.1 XP_041435875.1 mucosal addressin cell adhesion molecule 1 isoform X1 2433 bp XP_041435875 X. laevis.S
XM_018256048 XM_018256048.2 tubulin polyglutamylase complex subunit 1 2909 bp XP_018111537 X. laevis.L

Models - Gene (32)

Source Version Model Species
NCBI 10.1 XBXL10_1g1741 X. laevis.L
NCBI 10.1 XBXL10_1g4529 X. laevis.S
NCBI 10.0 XBXT10g018386 X. tropicalis
Xenbase 9.2 gene8935 X. laevis.S
Xenbase 9.2 gene10984 X. laevis.L
JGI 9.1 Xelaev18009934m.g X. laevis.S
JGI 9.1 Xelaev18006453m.g X. laevis.L
Xenbase 9.1 gene2278 X. tropicalis
JGI 7.1 Xetro.A02084 X. tropicalis
JGI 6.0 XeXenL6RMv10016831m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000006557 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5290037 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5290149 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_5290006 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5290146 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5290042 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_5290011 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_529000006 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_529000041 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_529000042 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_529000011 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5290041 X. tropicalis
JGI 4.1 e_gw1.529.10.1 X. tropicalis
JGI 4.1 e_gw1.529.146.1 X. tropicalis
JGI 4.1 e_gw1.529.149.1 X. tropicalis
JGI 4.1 e_gw1.529.37.1 X. tropicalis
JGI 4.1 gw1.529.10.1 X. tropicalis
JGI 4.1 gw1.529.146.1 X. tropicalis
JGI 4.1 gw1.529.149.1 X. tropicalis
JGI 4.1 gw1.529.37.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_5290031 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5290010 X. tropicalis

mRNAs based on gene models(32)

Source Version Model Species
NCBI 10.1 XBmRNA3076 X. laevis.L
NCBI 10.1 XBmRNA8409 X. laevis.S
NCBI 10.0 mRNA090743 X. tropicalis
Xenbase 9.2 rna31931 X. laevis.L
Xenbase 9.2 rna26021 X. laevis.S
JGI 9.1 Xelaev18006453m X. laevis.L
Xenbase 9.1 rna7501 X. tropicalis
JGI 9.1 Xelaev18009934m X. laevis.S
JGI 7.1 Xetro.A02084.1 X. tropicalis
JGI 6.0 XeXenL6RMv10016831m X. laevis.S
JGI 4.1 estExt_Genewise1.C_5290010 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5290037 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5290146 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5290149 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_529000006 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_529000041 X. tropicalis
JGI 4.1 e_gw1.529.10.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_529000011 X. tropicalis
JGI 4.1 gw1.529.10.1 X. tropicalis
JGI 4.1 gw1.529.146.1 X. tropicalis
JGI 4.1 gw1.529.149.1 X. tropicalis
JGI 4.1 gw1.529.37.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_529000042 X. tropicalis
JGI 4.1 e_gw1.529.146.1 X. tropicalis
JGI 4.1 e_gw1.529.149.1 X. tropicalis
JGI 4.1 e_gw1.529.37.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000014346 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_5290006 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5290041 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5290042 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_5290011 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_5290031 X. tropicalis

mRNAs from cDNA libraries (4)

Clone Accession Species Library Anatomy Stage
XM_002939764 X. tropicalis
XM_018243692 X. laevis.S
XM_041579941 X. laevis.S
XM_018256048 X. laevis.L

ESTs (25)

Clone Accession 5'/3' Species Library Anatomy Stage
xthr04E03 CN117568 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7513424 CX742802 5' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
TGas018b06 AL629617 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7546033 CX488718 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7626563 CX380034 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7513424 CX742801 3' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:7626563 CX380033 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7546033 CX488717 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
PBX0066F10 AW638149 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XL034o24 BJ043468 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:4957323 BI313397 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
PBX0027G02 AW634999 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0037F04 AW635742 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0046G04 AW636446 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0100E08 AW640938 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3746106 BE680780 5' X. laevis.S Xenopus laevis oocyte non normalized oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
xlk66e19ex DC056244 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk157n12ex DC063391 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:3579566 BG162962 5' X. laevis.S Wellcome CRC pRN3 head head NF stage 29 and 30
IMAGp998B158730 BX852626 5' X. laevis.S Wellcome CRC pRN3 head head NF stage 29 and 30
XL034o24 BJ057395 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:4957323 BI315031 3' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:3579566 BG021145 3' X. laevis.S Wellcome CRC pRN3 head head NF stage 29 and 30
rxlk66e19ex DC022821 3' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk157n12ex DC029894 3' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5