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Summary Expression Phenotypes Gene Literature (0) GO Terms (3) Nucleotides (135) Proteins (67) Interactants (12) Wiki
XB-GENEPAGE-6040149

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for ppfia3 - All

RefSeq mRNAs(8)
Models - Gene (30)
Models - mRNA (44)
mRNAs (12)
ESTs (27)

RefSeq mRNAs (8)

Accession Version name Length Protein Species
XM_041571648 XM_041571648.1 XP_041427582.1 liprin-alpha-3-like isoform X3 6254 bp XP_041427582 X. laevis.S
XM_041569656 XM_041569656.1 XP_041425590.1 liprin-alpha-3 isoform X1 7950 bp XP_041425590 X. laevis.L
XM_041569657 XM_041569657.1 XP_041425591.1 liprin-alpha-3 isoform X2 7928 bp XP_041425591 X. laevis.L
XM_041569658 XM_041569658.1 XP_041425592.1 liprin-alpha-3 isoform X3 8035 bp XP_041425592 X. laevis.L
XM_041569659 XM_041569659.1 XP_041425593.1 liprin-alpha-3 isoform X4 7886 bp XP_041425593 X. laevis.L
XM_041569660 XM_041569660.1 XP_041425594.1 liprin-alpha-3 isoform X5 7859 bp XP_041425594 X. laevis.L
XM_041571646 XM_041571646.1 XP_041427580.1 liprin-alpha-3-like isoform X1 6370 bp XP_041427580 X. laevis.S
XM_041571647 XM_041571647.1 XP_041427581.1 liprin-alpha-3-like isoform X2 6259 bp XP_041427581 X. laevis.S

Models - Gene (30)

Source Version Model Species
NCBI 10.0 XBXT10g011762 X. tropicalis
NCBI 10.1 XBXL10_1g33817 X. laevis.S
NCBI 10.1 XBXL10_1g31915 X. laevis.L
ENSEMBL 10.0 ppfia3 X. tropicalis
Xenbase 9.1 gene24068 X. tropicalis
ENSEMBL 9.1 ppfia3 X. tropicalis
JGI 7.1 Xetro.G02073 X. tropicalis
JGI 6.0 XeXenL6RMv10010910m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000000265 X. tropicalis
JGI 4.1 C_scaffold_106000011 X. tropicalis
JGI 4.1 e_gw1.106.21.1 X. tropicalis
JGI 4.1 e_gw1.106.22.1 X. tropicalis
JGI 4.1 e_gw1.106.245.1 X. tropicalis
JGI 4.1 e_gw1.106.246.1 X. tropicalis
JGI 4.1 e_gw1.106.28.1 X. tropicalis
JGI 4.1 e_gw1.106.67.1 X. tropicalis
JGI 4.1 gw1.106.21.1 X. tropicalis
JGI 4.1 gw1.106.22.1 X. tropicalis
JGI 4.1 gw1.106.245.1 X. tropicalis
JGI 4.1 gw1.106.246.1 X. tropicalis
JGI 4.1 gw1.106.28.1 X. tropicalis
JGI 4.1 gw1.106.67.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1060021 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1060067 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1060240 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1060241 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1060032 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1060016 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_106000032 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_106000016 X. tropicalis

mRNAs based on gene models(44)

Source Version Model Species
NCBI 10.0 mRNA058397 X. tropicalis
NCBI 10.1 XBmRNA60231 X. laevis.L
NCBI 10.1 XBmRNA63869 X. laevis.S
ENSEMBL 10.0 ENSXETT00000094417 X. tropicalis
ENSEMBL 10.0 ENSXETT00000079682 X. tropicalis
ENSEMBL 10.0 ENSXETT00000070953 X. tropicalis
ENSEMBL 10.0 ENSXETT00000000533 X. tropicalis
Xenbase 9.1 rna48032 X. tropicalis
ENSEMBL 9.1 ENSXETT00000070953 X. tropicalis
ENSEMBL 9.1 ENSXETT00000000533 X. tropicalis
ENSEMBL 9.1 ENSXETT00000071920 X. tropicalis
ENSEMBL 9.1 ENSXETT00000092670 X. tropicalis
ENSEMBL 9.1 ENSXETT00000082895 X. tropicalis
ENSEMBL 9.1 ENSXETT00000088729 X. tropicalis
ENSEMBL 9.1 ENSXETT00000094417 X. tropicalis
ENSEMBL 9.1 ENSXETT00000075381 X. tropicalis
ENSEMBL 9.1 ENSXETT00000079682 X. tropicalis
ENSEMBL 9.1 ENSXETT00000093355 X. tropicalis
JGI 7.1 Xetro.G02073.3 X. tropicalis
JGI 7.1 Xetro.G02073.2 X. tropicalis
JGI 7.1 Xetro.G02073.1 X. tropicalis
JGI 6.0 XeXenL6RMv10010910m X. laevis.S
JGI 4.1 C_scaffold_106000011 X. tropicalis
ENSEMBL 4.1 ENSXETT00000000533 X. tropicalis
JGI 4.1 e_gw1.106.21.1 X. tropicalis
JGI 4.1 e_gw1.106.22.1 X. tropicalis
JGI 4.1 e_gw1.106.245.1 X. tropicalis
JGI 4.1 e_gw1.106.246.1 X. tropicalis
JGI 4.1 e_gw1.106.28.1 X. tropicalis
JGI 4.1 e_gw1.106.67.1 X. tropicalis
JGI 4.1 gw1.106.21.1 X. tropicalis
JGI 4.1 gw1.106.22.1 X. tropicalis
JGI 4.1 gw1.106.245.1 X. tropicalis
JGI 4.1 gw1.106.246.1 X. tropicalis
JGI 4.1 gw1.106.28.1 X. tropicalis
JGI 4.1 gw1.106.67.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1060021 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1060067 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1060240 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1060241 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1060032 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1060016 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_106000032 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_106000016 X. tropicalis

mRNAs from cDNA libraries (12)

Clone Accession Species Library Anatomy Stage
XM_012967553 X. tropicalis
XM_012967552 X. tropicalis
XM_012967551 X. tropicalis
XM_012967550 X. tropicalis
XM_041571648 X. laevis.S
XM_041571647 X. laevis.S
XM_041571646 X. laevis.S
XM_041569660 X. laevis.L
XM_041569659 X. laevis.L
XM_041569658 X. laevis.L
XM_041569657 X. laevis.L
XM_041569656 X. laevis.L

ESTs (27)

Clone Accession 5'/3' Species Library Anatomy Stage
xtbs16M20 CN079386 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7626097 CX378998 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7661619 CX843049 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7660551 CX840830 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7652573 CX815081 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7649285 CX809184 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7645936 CX803445 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7645542 CX802680 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7644544 CX800708 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7641248 CX794994 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7640917 CX794015 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7585821 CX318935 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
xthr11C12 CN096311 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xtbs16M20 CN079385 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7626097 CX378997 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7661619 CX843048 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7585821 DR890189 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7645936 CX803444 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7645542 CX802679 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7660551 CX840829 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7652573 CX815080 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7649285 CX809183 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7644544 CX800707 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7641248 CX794993 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7640917 CX794014 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
xthr11C12 CN096310 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
za36f11 AW158197 5' X. laevis.S Xenopus EST library brain NF stage 45 to NF stage 66