Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (1) GO Terms (9) Nucleotides (156) Proteins (63) Interactants (89) Wiki
XB-GENEPAGE-6034567

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for col4a6 - Xenopus laevis

RefSeq mRNAs(7)
Models - Gene (6)
Models - mRNA (6)
mRNAs (7)
ESTs (15)

RefSeq mRNAs (7)

Accession Version name Length Protein Species
XM_018232970 XM_018232970.2 collagen alpha-6(IV) chain isoform X3 4699 bp XP_018088459 X. laevis.S
XM_041575196 XM_041575196.1 XP_041431130.1 collagen alpha-6(IV) chain isoform X1 4774 bp XP_041431130 X. laevis.S
XM_041575197 XM_041575197.1 XP_041431131.1 collagen alpha-6(IV) chain isoform X2 4765 bp XP_041431131 X. laevis.S
XM_018229831 XM_018229831.2 collagen alpha-6(IV) chain isoform X1 7289 bp XP_018085320 X. laevis.L
XM_018229832 XM_018229832.2 collagen alpha-6(IV) chain isoform X2 7280 bp XP_018085321 X. laevis.L
XM_018229833 XM_018229833.2 collagen alpha-6(IV) chain isoform X3 7235 bp XP_018085322 X. laevis.L
XM_018232970 XM_018232970. collagen alpha-6(IV) chain isoform X3 4699 bp XP_018088459 X. laevis.S

Models - Gene (6)

Source Version Model Species
NCBI 10.1 XBXL10_1g35086 X. laevis.L
NCBI 10.1 XBXL10_1g37974 X. laevis.S
JGI 9.1 Xelaev18038789m.g X. laevis.L
JGI 9.1 Xelaev18042109m.g X. laevis.S
Xenbase 9.2 gene2392 X. laevis.L
JGI 6.0 XeXenL6RMv10047753m.g X. laevis.L

mRNAs based on gene models(6)

Source Version Model Species
NCBI 10.1 XBmRNA66258 X. laevis.L
NCBI 10.1 XBmRNA71785 X. laevis.S
JGI 9.1 Xelaev18038789m X. laevis.L
JGI 9.1 Xelaev18042109m X. laevis.S
Xenbase 9.2 rna6961 X. laevis.L
JGI 6.0 XeXenL6RMv10047753m X. laevis.L

mRNAs from cDNA libraries (7)

Clone Accession Species Library Anatomy Stage
XM_018232970 X. laevis.S
XM_018232970 X. laevis.S
XM_018229833 X. laevis.L
XM_018229832 X. laevis.L
XM_018229831 X. laevis.L
XM_041575197 X. laevis.S
XM_041575196 X. laevis.S

ESTs (15)

Clone Accession 5'/3' Species Library Anatomy Stage
xl326b13 DC130875 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL508i11ex BP703477 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL507i11ex BP703189 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGp998E1910201 BX855301 5' X. laevis.L Wellcome CRC pcDNAI St24-26 whole organism NF stage 24 to NF stage 26
IMAGp998F117824 BX854362 5' X. laevis.L Harland stage 19-23 whole organism NF stage 19 to NF stage 23
XL097i08 BJ073613 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:5542765 BQ736431 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:3581001 BG656680 5' X. laevis.L Wellcome CRC pRN3 head head NF stage 29 and 30
IMAGE:3200650 AW765579 5' X. laevis.L Harland stage 19-23 whole organism NF stage 19 to NF stage 23
XL508i11ex BP736377 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL507i11ex BP736097 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL097i08 BJ091559 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL093k07 BJ088641 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL079i12 BJ082254 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:3581001 BG552461 3' X. laevis.L Wellcome CRC pRN3 head head NF stage 29 and 30