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Summary Expression Phenotypes Gene Literature (1) GO Terms (9) Nucleotides (156) Proteins (63) Interactants (89) Wiki
XB-GENEPAGE-6034567

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for col4a6 - Xenopus tropicalis

RefSeq mRNAs(3)
Models - Gene (24)
Models - mRNA (27)
mRNAs (3)
ESTs (35)

RefSeq mRNAs (3)

Accession Version name Length Protein Species
XM_012968993 XM_012968993.3 collagen alpha-6(IV) chain isoform X1 7490 bp XP_012824447 X. tropicalis
XM_031892000 XM_031892000.1 XP_031747860.1 collagen alpha-6(IV) chain isoform X2 7481 bp XP_031747860 X. tropicalis
XM_031892001 XM_031892001.1 XP_031747861.1 collagen alpha-6(IV) chain isoform X3 7436 bp XP_031747861 X. tropicalis

Models - Gene (24)

Source Version Model Species
NCBI 10.0 XBXT10g015058 X. tropicalis
ENSEMBL 10.0 col4a6 X. tropicalis
Xenbase 9.1 gene23546 X. tropicalis
ENSEMBL 9.1 col4a6 X. tropicalis
JGI 7.1 Xetro.H00630 X. tropicalis
ENSEMBL 4.1 ENSXETG00000001547 X. tropicalis
JGI 4.1 estExt_Genewise1.C_100193 X. tropicalis
JGI 4.1 e_gw1.10.192.1 X. tropicalis
JGI 4.1 e_gw1.10.193.1 X. tropicalis
JGI 4.1 e_gw1.10.351.1 X. tropicalis
JGI 4.1 e_gw1.10.352.1 X. tropicalis
JGI 4.1 e_gw1.10.88.1 X. tropicalis
JGI 4.1 gw1.10.192.1 X. tropicalis
JGI 4.1 gw1.10.193.1 X. tropicalis
JGI 4.1 gw1.10.351.1 X. tropicalis
JGI 4.1 gw1.10.352.1 X. tropicalis
JGI 4.1 gw1.10.88.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_100008 X. tropicalis
JGI 4.1 estExt_Genewise1.C_100088 X. tropicalis
JGI 4.1 estExt_Genewise1.C_100192 X. tropicalis
JGI 4.1 estExt_Genewise1.C_100351 X. tropicalis
JGI 4.1 estExt_Genewise1.C_100352 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_100012 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_10000012 X. tropicalis

mRNAs based on gene models(27)

Source Version Model Species
NCBI 10.0 mRNA074488 X. tropicalis
ENSEMBL 10.0 ENSXETT00000120007 X. tropicalis
ENSEMBL 10.0 ENSXETT00000099807 X. tropicalis
ENSEMBL 10.0 ENSXETT00000003225 X. tropicalis
Xenbase 9.1 rna47171 X. tropicalis
ENSEMBL 9.1 ENSXETT00000099807 X. tropicalis
ENSEMBL 9.1 ENSXETT00000003225 X. tropicalis
JGI 7.1 Xetro.H00630.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_100193 X. tropicalis
ENSEMBL 4.1 ENSXETT00000003225 X. tropicalis
JGI 4.1 e_gw1.10.192.1 X. tropicalis
JGI 4.1 e_gw1.10.193.1 X. tropicalis
JGI 4.1 e_gw1.10.351.1 X. tropicalis
JGI 4.1 e_gw1.10.352.1 X. tropicalis
JGI 4.1 e_gw1.10.88.1 X. tropicalis
JGI 4.1 gw1.10.192.1 X. tropicalis
JGI 4.1 gw1.10.193.1 X. tropicalis
JGI 4.1 gw1.10.351.1 X. tropicalis
JGI 4.1 gw1.10.352.1 X. tropicalis
JGI 4.1 gw1.10.88.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_100008 X. tropicalis
JGI 4.1 estExt_Genewise1.C_100088 X. tropicalis
JGI 4.1 estExt_Genewise1.C_100192 X. tropicalis
JGI 4.1 estExt_Genewise1.C_100351 X. tropicalis
JGI 4.1 estExt_Genewise1.C_100352 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_100012 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_10000012 X. tropicalis

mRNAs from cDNA libraries (3)

Clone Accession Species Library Anatomy Stage
XM_012968993 X. tropicalis
XM_031892001 X. tropicalis
XM_031892000 X. tropicalis

ESTs (35)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8960407 EL663594 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
IMAGE:8964679 EL662153 5' X. tropicalis NICHD_XGC_tropInt_66 intestine unspecified stage
IMAGE:8954028 EL659581 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
IMAGE:8961666 EL655987 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
IMAGE:8952636 EG656176 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
IMAGE:8952612 EG652941 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
XZT11892 CX312356 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7791731 CX340219 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7790359 CX323607 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7623707 CX372978 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7618000 CX362695 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7592045 CX325466 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7601406 CX364466 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7852239 DT391809 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7797727 DR885470 5' X. tropicalis NIH_XGC_tropMet5 whole organism NF stage 62
IMAGE:7797318 DR885335 5' X. tropicalis NIH_XGC_tropMet5 whole organism NF stage 62
IMAGE:7802633 DR836342 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7587785 CX314143 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
THdA005n02 CR566715 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTpA056k19 BX729388 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:5381387 BQ527095 5' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:5381026 BQ525908 5' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
rst5d14 DC144157 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
XZT11892 CX312355 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7852239 DT391808 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7791731 DR906323 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7623707 DR899289 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7797727 DR885469 3' X. tropicalis NIH_XGC_tropMet5 whole organism NF stage 62
IMAGE:7513920 CX743515 3' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:7618000 CX362694 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7587785 CX314142 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
THdA005n02 CR566716 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTpA056k19 BX729389 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:5381387 BQ527094 3' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:5381026 BQ525907 3' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45