Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (0) GO Terms (10) Nucleotides (105) Proteins (60) Interactants (0) Wiki
XB-GENEPAGE-6032746

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for col27a1 - Xenopus tropicalis

RefSeq mRNAs(2)
Models - Gene (29)
Models - mRNA (32)
mRNAs (2)
ESTs (4)

RefSeq mRNAs (2)

Accession Version name Length Protein Species
XM_002935498 XM_002935498.5 collagen alpha-1(XXVII) chain isoform X2 5670 bp XP_002935544 X. tropicalis
XM_004916698 XM_004916698.4 collagen alpha-1(XXVII) chain isoform X1 7121 bp XP_004916755 X. tropicalis

Models - Gene (29)

Source Version Model Species
NCBI 10.0 XBXT10g017282 X. tropicalis
ENSEMBL 10.0 col27a1 X. tropicalis
Xenbase 9.1 gene23998 X. tropicalis
ENSEMBL 9.1 col27a1 X. tropicalis
JGI 7.1 Xetro.H00230 X. tropicalis
ENSEMBL 4.1 ENSXETG00000021972 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_154000075 X. tropicalis
JGI 4.1 gw1.154.11.1 X. tropicalis
JGI 4.1 gw1.154.12.1 X. tropicalis
JGI 4.1 gw1.154.267.1 X. tropicalis
JGI 4.1 gw1.154.274.1 X. tropicalis
JGI 4.1 gw1.154.275.1 X. tropicalis
JGI 4.1 gw1.154.294.1 X. tropicalis
JGI 4.1 gw1.154.52.1 X. tropicalis
JGI 4.1 gw1.154.55.1 X. tropicalis
JGI 4.1 e_gw1.154.11.1 X. tropicalis
JGI 4.1 e_gw1.154.12.1 X. tropicalis
JGI 4.1 e_gw1.154.170.1 X. tropicalis
JGI 4.1 e_gw1.154.174.1 X. tropicalis
JGI 4.1 e_gw1.154.180.1 X. tropicalis
JGI 4.1 e_gw1.154.267.1 X. tropicalis
JGI 4.1 e_gw1.154.274.1 X. tropicalis
JGI 4.1 e_gw1.154.275.1 X. tropicalis
JGI 4.1 e_gw1.154.294.1 X. tropicalis
JGI 4.1 e_gw1.154.52.1 X. tropicalis
JGI 4.1 e_gw1.154.55.1 X. tropicalis
JGI 4.1 gw1.154.170.1 X. tropicalis
JGI 4.1 gw1.154.174.1 X. tropicalis
JGI 4.1 gw1.154.180.1 X. tropicalis

mRNAs based on gene models(32)

Source Version Model Species
NCBI 10.0 mRNA085483 X. tropicalis
ENSEMBL 10.0 ENSXETT00000091517 X. tropicalis
ENSEMBL 10.0 ENSXETT00000047552 X. tropicalis
Xenbase 9.1 rna47915 X. tropicalis
ENSEMBL 9.1 ENSXETT00000047552 X. tropicalis
ENSEMBL 9.1 ENSXETT00000091517 X. tropicalis
ENSEMBL 9.1 ENSXETT00000104142 X. tropicalis
JGI 7.1 Xetro.H00230.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_154000075 X. tropicalis
ENSEMBL 4.1 ENSXETT00000047552 X. tropicalis
JGI 4.1 e_gw1.154.11.1 X. tropicalis
JGI 4.1 e_gw1.154.12.1 X. tropicalis
JGI 4.1 e_gw1.154.170.1 X. tropicalis
JGI 4.1 e_gw1.154.174.1 X. tropicalis
JGI 4.1 e_gw1.154.180.1 X. tropicalis
JGI 4.1 e_gw1.154.267.1 X. tropicalis
JGI 4.1 e_gw1.154.274.1 X. tropicalis
JGI 4.1 e_gw1.154.275.1 X. tropicalis
JGI 4.1 e_gw1.154.294.1 X. tropicalis
JGI 4.1 e_gw1.154.52.1 X. tropicalis
JGI 4.1 e_gw1.154.55.1 X. tropicalis
JGI 4.1 gw1.154.11.1 X. tropicalis
JGI 4.1 gw1.154.12.1 X. tropicalis
JGI 4.1 gw1.154.267.1 X. tropicalis
JGI 4.1 gw1.154.274.1 X. tropicalis
JGI 4.1 gw1.154.275.1 X. tropicalis
JGI 4.1 gw1.154.294.1 X. tropicalis
JGI 4.1 gw1.154.52.1 X. tropicalis
JGI 4.1 gw1.154.55.1 X. tropicalis
JGI 4.1 gw1.154.170.1 X. tropicalis
JGI 4.1 gw1.154.174.1 X. tropicalis
JGI 4.1 gw1.154.180.1 X. tropicalis

mRNAs from cDNA libraries (2)

Clone Accession Species Library Anatomy Stage
XM_002935498 X. tropicalis
XM_004916698 X. tropicalis

ESTs (4)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8940728 EL645259 5' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
IMAGE:7615148 CX391531 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:8940728 EL645258 3' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
IMAGE:7615148 CX391530 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41