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Summary Expression Phenotypes Gene Literature (1) GO Terms (12) Nucleotides (205) Proteins (70) Interactants (33) Wiki
XB-GENEPAGE-5998531

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for hacd2 - Xenopus tropicalis

RefSeq mRNAs(1)
Models - Gene (26)
Models - mRNA (43)
mRNAs (2)
ESTs (36)

RefSeq mRNAs (1)

Accession Version name Length Protein Species
NM_001142156 NM_001142156.1 very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 4104 bp NP_001135628 X. tropicalis

Models - Gene (26)

Source Version Model Species
NCBI 10.0 XBXT10g009091 X. tropicalis
ENSEMBL 10.0 hacd2 X. tropicalis
Xenbase 9.1 gene1228 X. tropicalis
ENSEMBL 9.1 kif2a X. tropicalis
ENSEMBL 9.1 kif2a X. tropicalis
JGI 8.0 Xetrov14051319m.g X. tropicalis
JGI 7.1 Xetro.K03043 X. tropicalis
ENSEMBL 4.1 ENSXETG00000007988 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_16110005 X. tropicalis
JGI 4.1 gw1.1611.23.1 X. tropicalis
JGI 4.1 gw1.1611.21.1 X. tropicalis
JGI 4.1 gw1.1611.22.1 X. tropicalis
JGI 4.1 e_gw1.1611.21.1 X. tropicalis
JGI 4.1 e_gw1.1611.22.1 X. tropicalis
JGI 4.1 e_gw1.1611.23.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_16110004 X. tropicalis
JGI 4.1 estExt_Genewise1.C_16110021 X. tropicalis
JGI 4.1 estExt_Genewise1.C_16110022 X. tropicalis
JGI 4.1 estExt_Genewise1.C_16110023 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_16110002 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_16110006 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_16110003 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_1611000002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_1611000005 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_1611000006 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_1611000003 X. tropicalis

mRNAs based on gene models(43)

Source Version Model Species
NCBI 10.0 mRNA045049 X. tropicalis
ENSEMBL 10.0 ENSXETT00000098677 X. tropicalis
ENSEMBL 10.0 ENSXETT00000114861 X. tropicalis
ENSEMBL 10.0 ENSXETT00000107577 X. tropicalis
ENSEMBL 10.0 ENSXETT00000123077 X. tropicalis
ENSEMBL 10.0 ENSXETT00000120473 X. tropicalis
ENSEMBL 10.0 ENSXETT00000107640 X. tropicalis
ENSEMBL 10.0 ENSXETT00000123508 X. tropicalis
ENSEMBL 10.0 ENSXETT00000114487 X. tropicalis
ENSEMBL 10.0 ENSXETT00000115487 X. tropicalis
ENSEMBL 10.0 ENSXETT00000105325 X. tropicalis
Xenbase 9.1 rna3925 X. tropicalis
ENSEMBL 9.1 ENSXETT00000071170 X. tropicalis
ENSEMBL 9.1 ENSXETT00000079970 X. tropicalis
ENSEMBL 9.1 ENSXETT00000067101 X. tropicalis
ENSEMBL 9.1 ENSXETT00000032456 X. tropicalis
ENSEMBL 9.1 ENSXETT00000100325 X. tropicalis
ENSEMBL 9.1 ENSXETT00000098326 X. tropicalis
ENSEMBL 9.1 ENSXETT00000087646 X. tropicalis
ENSEMBL 9.1 ENSXETT00000070934 X. tropicalis
ENSEMBL 9.1 ENSXETT00000098677 X. tropicalis
JGI 8.0 Xetrov14051319m X. tropicalis
JGI 7.1 Xetro.K03043.2 X. tropicalis
JGI 7.1 Xetro.K03043.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_16110005 X. tropicalis
ENSEMBL 4.1 ENSXETT00000017509 X. tropicalis
JGI 4.1 e_gw1.1611.21.1 X. tropicalis
JGI 4.1 e_gw1.1611.22.1 X. tropicalis
JGI 4.1 e_gw1.1611.23.1 X. tropicalis
JGI 4.1 gw1.1611.21.1 X. tropicalis
JGI 4.1 gw1.1611.22.1 X. tropicalis
JGI 4.1 gw1.1611.23.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_16110004 X. tropicalis
JGI 4.1 estExt_Genewise1.C_16110021 X. tropicalis
JGI 4.1 estExt_Genewise1.C_16110022 X. tropicalis
JGI 4.1 estExt_Genewise1.C_16110023 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_16110002 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_16110006 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_16110003 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_1611000002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_1611000005 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_1611000006 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_1611000003 X. tropicalis

mRNAs from cDNA libraries (2)

Clone Accession Species Library Anatomy Stage
IMAGE:7685118 BC168480 X. tropicalis
NM_001142156 X. tropicalis

ESTs (36)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8892563 EL852825 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8965252 EL661711 5' X. tropicalis NICHD_XGC_tropInt_66 intestine unspecified stage
IMAGE:8966244 EL659614 5' X. tropicalis NICHD_XGC_tropInt_66 intestine unspecified stage
IMAGE:8966766 EL657788 5' X. tropicalis NICHD_XGC_tropInt_66 intestine unspecified stage
IMAGE:8963771 EL657633 5' X. tropicalis NICHD_XGC_tropInt_66 intestine unspecified stage
CAAO12468 CX963414 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7608803 CX409494 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7656147 CX827037 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7715083 CX974348 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7688929 CX911899 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7662654 CX845360 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7651782 CX813538 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7650224 CX810720 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7646266 CX804078 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7643506 CX799099 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7641824 CX795678 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7641007 CX793980 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7615150 CX391546 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TNeu013k05 AL641696 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:6976269 CF222960 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:5381342 BQ526906 5' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:8892563 EL852826 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7688929 CX911898 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7662654 CX845359 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7656147 CX827036 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7651782 CX813537 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7650224 CX810719 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7646266 CX804077 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7643506 CX799098 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7715083 CX974347 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7641824 CX795677 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7641007 CX793979 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7615150 CX391545 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTpA028a02 BX743064 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:6976269 CF222959 3' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:5381342 BQ526905 3' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45