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Summary Expression Phenotypes Gene Literature (0) GO Terms (12) Nucleotides (97) Proteins (67) Interactants (1) Wiki
XB-GENEPAGE-5967538

Show:     All X. tropicalis X. laevis

Nucleotide sequences for col25a1.2 - Xenopus tropicalis

RefSeq mRNAs(13)
Models - Gene (9)
Models - mRNA (10)
mRNAs (14)
ESTs (3)

RefSeq mRNAs (13)

Accession Version Protein Name Length Protein Species
NM_001130275 NM_001130275.1 collagen alpha-1(XXV) chain 9853 bp NP_001123747 X. tropicalis
XM_031895996 XM_031895996.1 XP_031751856.1 collagen alpha-1(XXV) chain isoform X1 9494 bp XP_031751856 X. tropicalis
XM_031895998 XM_031895998.1 XP_031751858.1 collagen alpha-1(XXV) chain isoform X2 9485 bp XP_031751858 X. tropicalis
XM_031896000 XM_031896000.1 XP_031751860.1 collagen alpha-1(XXV) chain isoform X3 9482 bp XP_031751860 X. tropicalis
XM_031896001 XM_031896001.1 XP_031751861.1 collagen alpha-1(XXV) chain isoform X4 9470 bp XP_031751861 X. tropicalis
XM_031896002 XM_031896002.1 XP_031751862.1 collagen alpha-1(XXV) chain isoform X5 10048 bp XP_031751862 X. tropicalis
XM_031896004 XM_031896004.1 XP_031751864.1 collagen alpha-1(XXV) chain isoform X6 9458 bp XP_031751864 X. tropicalis
XM_031896006 XM_031896006.1 XP_031751866.1 collagen alpha-1(XXV) chain isoform X7 10039 bp XP_031751866 X. tropicalis
XM_031896008 XM_031896008.1 XP_031751868.1 collagen alpha-1(XXV) chain isoform X8 9449 bp XP_031751868 X. tropicalis
XM_031896009 XM_031896009.1 XP_031751869.1 collagen alpha-1(XXV) chain isoform X9 9449 bp XP_031751869 X. tropicalis
XM_031896010 XM_031896010.1 XP_031751870.1 collagen alpha-1(XXV) chain isoform X10 9431 bp XP_031751870 X. tropicalis
XM_031896011 XM_031896011.1 XP_031751871.1 collagen alpha-1(XXV) chain isoform X11 9377 bp XP_031751871 X. tropicalis
XM_031896014 XM_031896014.1 XP_031751874.1 collagen alpha-1(XXV) chain isoform X12 9949 bp XP_031751874 X. tropicalis

Models - Gene (9)

Source Version Model Species
NCBI 10.0 XBXT10g006857 X. tropicalis
ENSEMBL 10.0 col25a1.2 X. tropicalis
Xenbase 9.1 gene20508 X. tropicalis
ENSEMBL 9.1 col25a1.2 X. tropicalis
JGI 7.1 Xetro.A02698 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_47860001 X. tropicalis
JGI 4.1 e_gw1.4786.1.1 X. tropicalis
JGI 4.1 gw1.4786.1.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_47860001 X. tropicalis

mRNAs based on gene models(10)

Source Version Model Species
ENSEMBL 10.0 ENSXETT00000110172 X. tropicalis
NCBI 10.0 mRNA033942 X. tropicalis
ENSEMBL 10.0 ENSXETT00000045601 X. tropicalis
Xenbase 9.1 rna42359 X. tropicalis
ENSEMBL 9.1 ENSXETT00000045601 X. tropicalis
JGI 7.1 Xetro.A02698.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_47860001 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_47860001 X. tropicalis
JGI 4.1 e_gw1.4786.1.1 X. tropicalis
JGI 4.1 gw1.4786.1.1 X. tropicalis

mRNAs from cDNA libraries (14)

Clone Accession Species Library Anatomy Stage
IMAGE:7641144 BC167458 X. tropicalis NIH_XGC_tropBrn2 brain frog
NM_001130275 X. tropicalis
XM_031895996 X. tropicalis
XM_031895998 X. tropicalis
XM_031896000 X. tropicalis
XM_031896001 X. tropicalis
XM_031896002 X. tropicalis
XM_031896004 X. tropicalis
XM_031896006 X. tropicalis
XM_031896008 X. tropicalis
XM_031896009 X. tropicalis
XM_031896010 X. tropicalis
XM_031896011 X. tropicalis
XM_031896014 X. tropicalis

ESTs (3)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7661605 CX842945 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:9012448 EL858025 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7641822 CX795662 3' X. tropicalis NIH_XGC_tropBrn2 brain frog