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Summary Expression Phenotypes Gene Literature (0) GO Terms (4) Nucleotides (106) Proteins (45) Interactants (21) Wiki
XB-GENEPAGE-5967037

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for alkbh3 - All

RefSeq mRNAs(3)
Models - Gene (26)
Models - mRNA (30)
mRNAs (9)
ESTs (16)

RefSeq mRNAs (3)

Accession Version name Length Protein Species
NM_001095334 NM_001095334.1 alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase L homeolog 1579 bp NP_001088803 X. laevis.L
XM_041589391 XM_041589391.1 XP_041445325.1 alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase L homeolog isoform X1 1584 bp XP_041445325 X. laevis.L
XM_041589392 XM_041589392.1 XP_041445326.1 alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase L homeolog isoform X1 1590 bp XP_041445326 X. laevis.L

Models - Gene (26)

Source Version Model Species
NCBI 10.0 XBXT10g019826 X. tropicalis
NCBI 10.1 XBXL10_1g17706 X. laevis.L
ENSEMBL 10.0 alkbh3 X. tropicalis
JGI 9.1 Xelaev18021810m.g X. laevis.L
Xenbase 9.1 gene5572 X. tropicalis
Xenbase 9.2 gene36665 X. laevis.L
ENSEMBL 9.1 alkbh3 X. tropicalis
JGI 8.0 Xetrov14016394m.g X. tropicalis
JGI 7.1 Xetro.D00334 X. tropicalis
JGI 7.2 Xelaev16033607m.g X. laevis.L
JGI 6.0 XeXenL6RMv10031045m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000022230 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_281000008 X. tropicalis
JGI 4.1 e_gw1.281.183.1 X. tropicalis
JGI 4.1 e_gw1.281.209.1 X. tropicalis
JGI 4.1 e_gw1.281.210.1 X. tropicalis
JGI 4.1 gw1.281.209.1 X. tropicalis
JGI 4.1 gw1.281.210.1 X. tropicalis
JGI 4.1 gw1.281.183.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2810004 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2810183 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2810209 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2810210 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2810008 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2810003 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_281000003 X. tropicalis

mRNAs based on gene models(30)

Source Version Model Species
NCBI 10.0 mRNA097851 X. tropicalis
NCBI 10.1 XBmRNA32628 X. laevis.L
ENSEMBL 10.0 ENSXETT00000048096 X. tropicalis
ENSEMBL 10.0 ENSXETT00000120496 X. tropicalis
JGI 9.1 Xelaev18021810m X. laevis.L
Xenbase 9.1 rna18066 X. tropicalis
Xenbase 9.2 rna77091 X. laevis.L
ENSEMBL 9.1 ENSXETT00000105144 X. tropicalis
ENSEMBL 9.1 ENSXETT00000048096 X. tropicalis
JGI 8.0 Xetrov14016394m X. tropicalis
JGI 7.1 Xetro.D00334.1 X. tropicalis
JGI 7.1 Xetro.D00334.2 X. tropicalis
JGI 7.1 Xetro.D00334.3 X. tropicalis
JGI 7.2 Xelaev16033607m X. laevis.L
JGI 6.0 XeXenL6RMv10031045m X. laevis.L
JGI 4.1 fgenesh1_pg.C_scaffold_281000008 X. tropicalis
ENSEMBL 4.1 ENSXETT00000048096 X. tropicalis
JGI 4.1 e_gw1.281.183.1 X. tropicalis
JGI 4.1 e_gw1.281.209.1 X. tropicalis
JGI 4.1 e_gw1.281.210.1 X. tropicalis
JGI 4.1 gw1.281.209.1 X. tropicalis
JGI 4.1 gw1.281.210.1 X. tropicalis
JGI 4.1 gw1.281.183.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2810004 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2810183 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2810209 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2810210 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2810008 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2810003 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_281000003 X. tropicalis

mRNAs from cDNA libraries (9)

Clone Accession Species Library Anatomy Stage
XM_002937298 X. tropicalis
XM_018093259 X. tropicalis
XM_018093258 X. tropicalis
IMAGE:7202976 BC087485 X. laevis.L
NM_001095334 X. laevis.L
XM_018256889 X. laevis.L
XM_018256888 X. laevis.L
XM_041589392 X. laevis.L
XM_041589391 X. laevis.L

ESTs (16)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8916866 EL830040 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8946929 EL652410 5' X. tropicalis NICHD_XGC_tropInt_54 intestine frog
IMAGE:7798416 DR886829 5' X. tropicalis NIH_XGC_tropMet6 whole organism NF stage 62
TGas065e02 AL674868 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:8916866 EL830041 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7798416 DR886828 3' X. tropicalis NIH_XGC_tropMet6 whole organism NF stage 62
TGas065e02 BX746159 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7981466 DR719185 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
XL489d21ex BP699965 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL087n11 BJ075223 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL080p06 BJ064857 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
PBX0144A01 AW644835 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
PBX0067D12 AW638215 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:7981466 DR719153 3' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
XL489d21ex BP732814 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL080p06 BJ076512 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25