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Summary Expression Phenotypes Gene Literature (0) GO Terms (0) Nucleotides (58) Proteins (32) Interactants (0) Wiki
XB-GENEPAGE-5961859

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for XB5961859 - All

RefSeq mRNAs(1)
Models - Gene (18)
Models - mRNA (21)
mRNAs (5)
ESTs (4)

RefSeq mRNAs (1)

Accession Version name Length Protein Species
NM_001045592 NM_001045592.1 provisional ortholog of tripartite motif containing 39 1599 bp NP_001039057 X. tropicalis

Models - Gene (18)

Source Version Model Species
NCBI 10.0 XBXT10g019663 X. tropicalis
NCBI 10.1 XBXL10_1g42231 X. laevis.S
ENSEMBL 10.0 trim39] X. tropicalis
JGI 9.1 Xelaev18045925m.g X. laevis.S
Xenbase 9.1 gene6708 X. tropicalis
Xenbase 9.2 gene12519 X. laevis.S
ENSEMBL 9.1 trim39] X. tropicalis
JGI 7.1 Xetro.J00811 X. tropicalis
JGI 6.0 XeXenL6RMv10046473m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000015146 X. tropicalis
JGI 4.1 e_gw1.610.93.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_6100019 X. tropicalis
JGI 4.1 e_gw1.610.6.1 X. tropicalis
JGI 4.1 gw1.610.6.1 X. tropicalis
JGI 4.1 gw1.610.93.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6100006 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6100093 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_610000002 X. tropicalis

mRNAs based on gene models(21)

Source Version Model Species
NCBI 10.0 mRNA097046 X. tropicalis
NCBI 10.1 XBmRNA79377 X. laevis.S
ENSEMBL 10.0 ENSXETT00000118641 X. tropicalis
ENSEMBL 10.0 ENSXETT00000109657 X. tropicalis
ENSEMBL 10.0 ENSXETT00000033170 X. tropicalis
JGI 9.1 Xelaev18045925m X. laevis.S
Xenbase 9.1 rna21667 X. tropicalis
Xenbase 9.2 rna36406 X. laevis.S
ENSEMBL 9.1 ENSXETT00000033170 X. tropicalis
JGI 7.1 Xetro.J00811.1 X. tropicalis
JGI 7.1 Xetro.J00811.2 X. tropicalis
JGI 6.0 XeXenL6RMv10046473m X. laevis.S
JGI 4.1 e_gw1.610.93.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000033170 X. tropicalis
JGI 4.1 e_gw1.610.6.1 X. tropicalis
JGI 4.1 gw1.610.6.1 X. tropicalis
JGI 4.1 gw1.610.93.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_6100019 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6100006 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6100093 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_610000002 X. tropicalis

mRNAs from cDNA libraries (5)

Clone Accession Species Library Anatomy Stage
NM_001045592 X. tropicalis
TGas131p12 CR848585 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:8945313 BC161439 X. tropicalis NICHD_XGC_tropInt_54 intestine frog
XM_012952525 X. tropicalis
XM_018237975 X. laevis.S

ESTs (4)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8945313 EG653459 5' X. tropicalis NICHD_XGC_tropInt_54 intestine frog
TGas131p12 AL967563 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas131p12 BX758947 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:8820985 EG584806 5' X. laevis.S NICHD_XGC_int_m whole organism NF stage 56 to NF stage 62