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Summary Expression Phenotypes Gene Literature (0) GO Terms (8) Nucleotides (112) Proteins (45) Interactants (6) Wiki
XB-GENEPAGE-5961466

Show:     All X. tropicalis X. laevis

Nucleotide sequences for tmco6 - All

RefSeq mRNAs(7)
Models - Gene (23)
Models - mRNA (27)
mRNAs (9)
ESTs (31)

RefSeq mRNAs (7)

Accession Version Protein Name Length Protein Species
NM_001126978 NM_001126978.1 transmembrane and coiled-coil domain-containing protein 6 1712 bp NP_001120450 X. tropicalis
XM_012958593 XM_012958593.3 transmembrane and coiled-coil domain-containing protein 6 isoform X1 1919 bp XP_012814047 X. tropicalis
XM_018256261 XM_018256261.2 transmembrane and coiled-coil domain-containing protein 6 1902 bp XP_018111750 X. laevis.S
XM_018256262 XM_018256262.2 transmembrane and coiled-coil domain-containing protein 6 1921 bp XP_018111751 X. laevis.S
XM_018256263 XM_018256263.2 transmembrane and coiled-coil domain-containing protein 6 1908 bp XP_018111752 X. laevis.S
XM_018256265 XM_018256265.2 transmembrane and coiled-coil domain-containing protein 6 1952 bp XP_018111754 X. laevis.S
XM_018256267 XM_018256267.2 transmembrane and coiled-coil domain-containing protein 6 1798 bp XP_018111756 X. laevis.S

Models - Gene (23)

Source Version Model Species
NCBI 10.1 XBXL10_1g16594 X. laevis.S
NCBI 10.0 XBXT10g014701 X. tropicalis
ENSEMBL 10.0 tmco6 X. tropicalis
Xenbase 9.2 gene3391 X. laevis.S
JGI 9.1 Xelaev18021608m.g X. laevis.S
Xenbase 9.1 gene3946 X. tropicalis
ENSEMBL 9.1 tmco6 X. tropicalis
JGI 7.1 Xetro.C00944 X. tropicalis
JGI 6.0 XeXenL6RMv10007532m.g X. laevis.S
JGI 4.1 estExt_Genewise1.C_5680049 X. tropicalis
JGI 4.1 e_gw1.568.15.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5680021 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_568000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_568000021 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_5680003 X. tropicalis
JGI 4.1 e_gw1.568.2.1 X. tropicalis
JGI 4.1 e_gw1.568.49.1 X. tropicalis
JGI 4.1 gw1.568.15.1 X. tropicalis
JGI 4.1 gw1.568.2.1 X. tropicalis
JGI 4.1 gw1.568.49.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_5680012 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5680002 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5680015 X. tropicalis

mRNAs based on gene models(27)

Source Version Model Species
NCBI 10.1 XBmRNA31178 X. laevis.S
ENSEMBL 10.0 ENSXETT00000095145 X. tropicalis
ENSEMBL 10.0 ENSXETT00000118851 X. tropicalis
ENSEMBL 10.0 ENSXETT00000063849 X. tropicalis
NCBI 10.0 mRNA072694 X. tropicalis
Xenbase 9.2 rna9864 X. laevis.S
ENSEMBL 9.1 ENSXETT00000063849 X. tropicalis
ENSEMBL 9.1 ENSXETT00000095145 X. tropicalis
Xenbase 9.1 rna12848 X. tropicalis
JGI 9.1 Xelaev18021608m X. laevis.S
JGI 7.1 Xetro.C00944.1 X. tropicalis
JGI 7.1 Xetro.C00944.2 X. tropicalis
JGI 6.0 XeXenL6RMv10007532m X. laevis.S
JGI 4.1 gw1.568.49.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5680049 X. tropicalis
JGI 4.1 e_gw1.568.2.1 X. tropicalis
JGI 4.1 e_gw1.568.49.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_5680003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5680021 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_5680012 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5680002 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5680015 X. tropicalis
JGI 4.1 e_gw1.568.15.1 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_568000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_568000021 X. tropicalis
JGI 4.1 gw1.568.15.1 X. tropicalis
JGI 4.1 gw1.568.2.1 X. tropicalis

mRNAs from cDNA libraries (9)

Clone Accession Species Library Anatomy Stage
IMAGE:8914260 BC161230 X. tropicalis NICHD_XGC_tropTe1 testis frog
TTpA003l06 CU075869 X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
NM_001126978 X. tropicalis
XM_012958593 X. tropicalis
XM_018256261 X. laevis.S
XM_018256262 X. laevis.S
XM_018256263 X. laevis.S
XM_018256265 X. laevis.S
XM_018256267 X. laevis.S

ESTs (31)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:9008717 EL809331 5' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
CAAO2829 CX933336 5' X. tropicalis NIH_XGC_tropTe5 testis frog
TTpA003l06 BX705027 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
CAAO4580 CX935805 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7092611 CK655237 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
IMAGE:7702783 CX937990 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7716847 CX977704 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
TTpA014l19 BX713463 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7718388 CX980873 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
THdA037h19 CR588399 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7805939 DR842360 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:8914260 EL827177 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
TTpA052c24 BX733372 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:8914959 EL837922 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7672269 CX880872 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
CAAO2829 CX933335 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:9008717 EL809332 3' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:7092500 CN316439 3' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
TNeu053f01 BX684394 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
THdA037h19 CR588400 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTpA003l06 BX705028 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA014l19 BX713464 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7672269 CX880871 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
CAAO4580 CX935804 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7702783 CX937989 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7718388 CX980872 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7805939 DR842359 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:8914260 EL827178 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8914959 EL837923 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:6934122 CB944867 5' X. laevis.S NICHD_XGC_Tad2 whole organism NF stage 62
PBX0096G08 AW640588 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage