Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (1) GO Terms (22) Nucleotides (119) Proteins (44) Interactants (93) Wiki
XB-GENEPAGE-5938601

Show:     All X. tropicalis X. laevis

Nucleotide sequences for usp48 - All

RefSeq mRNAs(4)
Models - Gene (17)
Models - mRNA (28)
mRNAs (7)
ESTs (46)

RefSeq mRNAs (4)

Accession Version Protein Name Length Protein Species
NM_001126695 NM_001126695.1 ubiquitin carboxyl-terminal hydrolase 48 3786 bp NP_001120167 X. tropicalis
XM_031904811 XM_031904811.1 XP_031760671.1 ubiquitin carboxyl-terminal hydrolase 48 isoform X1 2787 bp XP_031760671 X. tropicalis
XM_018226513 XM_018226513.2 ubiquitin carboxyl-terminal hydrolase 48 isoform X1 3815 bp XP_018082002 X. laevis.L
XM_018226514 XM_018226514.2 ubiquitin carboxyl-terminal hydrolase 48 isoform X2 3750 bp XP_018082003 X. laevis.L

Models - Gene (17)

Source Version Model Species
NCBI 10.1 XBXL10_1g32310 X. laevis.L
NCBI 10.0 XBXT10g016994 X. tropicalis
ENSEMBL 10.0 usp48 X. tropicalis
Xenbase 9.2 gene40832 X. laevis.L
JGI 9.1 Xelaev18036360m.g X. laevis.L
Xenbase 9.1 gene344 X. tropicalis
ENSEMBL 9.1 ptp4a2 X. tropicalis
JGI 7.1 Xetro.K02309 X. tropicalis
JGI 6.0 XeXenL6RMv10052999m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000020258 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_10517000001 X. tropicalis
JGI 4.1 e_gw1.10517.2.1 X. tropicalis
JGI 4.1 e_gw1.10517.3.1 X. tropicalis
JGI 4.1 gw1.10517.1.1 X. tropicalis
JGI 4.1 gw1.10517.2.1 X. tropicalis
JGI 4.1 gw1.10517.3.1 X. tropicalis
JGI 4.1 e_gw1.10517.1.1 X. tropicalis

mRNAs based on gene models(28)

Source Version Model Species
NCBI 10.1 XBmRNA60864 X. laevis.L
ENSEMBL 10.0 ENSXETT00000101434 X. tropicalis
ENSEMBL 10.0 ENSXETT00000038836 X. tropicalis
ENSEMBL 10.0 ENSXETT00000085168 X. tropicalis
ENSEMBL 10.0 ENSXETT00000103551 X. tropicalis
NCBI 10.0 mRNA084192 X. tropicalis
Xenbase 9.2 rna82999 X. laevis.L
ENSEMBL 9.1 ENSXETT00000101434 X. tropicalis
ENSEMBL 9.1 ENSXETT00000103551 X. tropicalis
ENSEMBL 9.1 ENSXETT00000104498 X. tropicalis
Xenbase 9.1 rna1063 X. tropicalis
JGI 9.1 Xelaev18036360m X. laevis.L
ENSEMBL 9.1 ENSXETT00000038836 X. tropicalis
ENSEMBL 9.1 ENSXETT00000074858 X. tropicalis
ENSEMBL 9.1 ENSXETT00000082015 X. tropicalis
ENSEMBL 9.1 ENSXETT00000085168 X. tropicalis
ENSEMBL 9.1 ENSXETT00000091930 X. tropicalis
JGI 7.1 Xetro.K02309.1 X. tropicalis
JGI 7.1 Xetro.K02309.2 X. tropicalis
JGI 6.0 XeXenL6RMv10052999m X. laevis.L
JGI 4.1 gw1.10517.3.1 X. tropicalis
JGI 4.1 gw1.10517.2.1 X. tropicalis
JGI 4.1 gw1.10517.1.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_10517000001 X. tropicalis
ENSEMBL 4.1 ENSXETT00000043694 X. tropicalis
JGI 4.1 e_gw1.10517.3.1 X. tropicalis
JGI 4.1 e_gw1.10517.2.1 X. tropicalis
JGI 4.1 e_gw1.10517.1.1 X. tropicalis

mRNAs from cDNA libraries (7)

Clone Accession Species Library Anatomy Stage
IMAGE:7524616 BC158903 X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7694473 BC159174 X. tropicalis NIH_XGC_tropTe4 testis frog
NM_001126695 X. tropicalis
XM_031904811 X. tropicalis
XR_001169304 X. tropicalis
XM_018226513 X. laevis.L
XM_018226514 X. laevis.L

ESTs (46)

Clone Accession 5'/3' Species Library Anatomy Stage
TNeu099b09 AL791764 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
st30b08 DC171988 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st43j18 DC177542 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st64h13 DC182544 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st68a05 DC183435 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7026297 CF783406 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
IMAGE:7578434 CX416502 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7531000 CX420727 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7524616 CX439355 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7542644 CX450176 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7552267 CX494280 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7551596 CX510960 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7586703 CX312512 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7653669 CX822168 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7689839 CX913315 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7694473 CX922066 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7695199 CX923181 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:8890194 EL850107 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:9011638 EL856849 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:9014247 EL860297 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7542644 CX450175 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:9011638 EL856850 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7552267 CX494279 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7695199 CX923180 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7551596 CX510959 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7653669 CX822167 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
rst30b08 DC141684 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
TNeu099b09 BX694880 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7578434 CX416501 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8890194 EL850108 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7531000 CX420726 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7689839 CX913314 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7524616 CX439354 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
rst43j18 DC147261 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst64h13 DC152296 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst68a05 DC153239 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:9014247 EL860298 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7026297 CF783405 3' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
XL418h04ex BP675012 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL422n12ex BP676754 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
xl327g06 DC131273 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL087b17 BJ074990 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL422n12ex BP713987 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
rxl327g06 DC095364 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL418h04ex BP712526 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL087b17 BJ092386 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25