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Summary Expression Phenotypes Gene Literature (1) GO Terms (20) Nucleotides (187) Proteins (52) Interactants (11) Wiki
XB-GENEPAGE-5931147

Show:     All X. tropicalis X. laevis

Nucleotide sequences for trappc11 - All

RefSeq mRNAs(4)
Models - Gene (33)
Models - mRNA (40)
mRNAs (8)
ESTs (61)

RefSeq mRNAs (4)

Accession Version Protein Name Length Protein Species
NM_001130331 NM_001130331.1 trafficking protein particle complex subunit 11 5201 bp NP_001123803 X. tropicalis
XM_031896020 XM_031896020.1 XP_031751880.1 trafficking protein particle complex subunit 11 isoform X1 3832 bp XP_031751880 X. tropicalis
NM_001094974 NM_001094974.1 uncharacterized protein LOC495307 2094 bp NP_001088443 X. laevis.S
XM_041589082 XM_041589082.1 XP_041445016.1 trafficking protein particle complex subunit 11 4317 bp XP_041445016 X. laevis.L

Models - Gene (33)

Source Version Model Species
NCBI 10.1 XBXL10_1g889 X. laevis.L
NCBI 10.1 XBXL10_1g3854 X. laevis.S
NCBI 10.0 XBXT10g007417 X. tropicalis
ENSEMBL 10.0 trappc11 X. tropicalis
Xenbase 9.2 gene17041 X. laevis.L
Xenbase 9.2 gene7791 X. laevis.S
JGI 9.1 Xelaev18005377m.g X. laevis.L
JGI 9.1 Xelaev18009133m.g X. laevis.S
Xenbase 9.1 gene30108 X. tropicalis
ENSEMBL 9.1 trappc11 X. tropicalis
JGI 8.0 Xetrov14004915m.g X. tropicalis
JGI 7.2 Xelaev16052274m.g X. laevis.S
JGI 7.1 Xetro.A02970 X. tropicalis
JGI 6.0 XeXenL6RMv10000325m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000019069 X. tropicalis
JGI 4.1 estExt_Genewise1.C_900088 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_900009 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_90000037 X. tropicalis
JGI 4.1 estExt_Genewise1.C_900024 X. tropicalis
JGI 4.1 e_gw1.90.24.1 X. tropicalis
JGI 4.1 e_gw1.90.25.1 X. tropicalis
JGI 4.1 e_gw1.90.31.1 X. tropicalis
JGI 4.1 e_gw1.90.90.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_900037 X. tropicalis
JGI 4.1 gw1.90.18.1 X. tropicalis
JGI 4.1 gw1.90.24.1 X. tropicalis
JGI 4.1 gw1.90.25.1 X. tropicalis
JGI 4.1 gw1.90.31.1 X. tropicalis
JGI 4.1 gw1.90.90.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_900015 X. tropicalis
JGI 4.1 estExt_Genewise1.C_900017 X. tropicalis
JGI 4.1 estExt_Genewise1.C_900023 X. tropicalis
JGI 4.1 e_gw1.90.18.1 X. tropicalis

mRNAs based on gene models(40)

Source Version Model Species
NCBI 10.1 XBmRNA7047 X. laevis.S
NCBI 10.1 XBmRNA1330 X. laevis.L
NCBI 10.0 mRNA036754 X. tropicalis
ENSEMBL 10.0 ENSXETT00000041337 X. tropicalis
ENSEMBL 10.0 ENSXETT00000083312 X. tropicalis
Xenbase 9.2 rna49793 X. laevis.L
Xenbase 9.2 rna22743 X. laevis.S
ENSEMBL 9.1 ENSXETT00000095448 X. tropicalis
ENSEMBL 9.1 ENSXETT00000041337 X. tropicalis
ENSEMBL 9.1 ENSXETT00000068512 X. tropicalis
ENSEMBL 9.1 ENSXETT00000079451 X. tropicalis
ENSEMBL 9.1 ENSXETT00000080193 X. tropicalis
Xenbase 9.1 rna57709 X. tropicalis
JGI 9.1 Xelaev18009133m X. laevis.S
JGI 9.1 Xelaev18005377m X. laevis.L
ENSEMBL 9.1 ENSXETT00000083312 X. tropicalis
JGI 8.0 Xetrov14004915m X. tropicalis
JGI 7.2 Xelaev16052274m X. laevis.S
JGI 7.1 Xetro.A02970.2 X. tropicalis
JGI 7.1 Xetro.A02970.1 X. tropicalis
JGI 6.0 XeXenL6RMv10000325m X. laevis.S
JGI 4.1 estExt_Genewise1.C_900088 X. tropicalis
JGI 4.1 e_gw1.90.24.1 X. tropicalis
JGI 4.1 e_gw1.90.25.1 X. tropicalis
JGI 4.1 e_gw1.90.31.1 X. tropicalis
JGI 4.1 e_gw1.90.90.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000041337 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_900037 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_900009 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_900015 X. tropicalis
JGI 4.1 estExt_Genewise1.C_900017 X. tropicalis
JGI 4.1 estExt_Genewise1.C_900023 X. tropicalis
JGI 4.1 estExt_Genewise1.C_900024 X. tropicalis
JGI 4.1 e_gw1.90.18.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_90000037 X. tropicalis
JGI 4.1 gw1.90.18.1 X. tropicalis
JGI 4.1 gw1.90.24.1 X. tropicalis
JGI 4.1 gw1.90.25.1 X. tropicalis
JGI 4.1 gw1.90.31.1 X. tropicalis
JGI 4.1 gw1.90.90.1 X. tropicalis

mRNAs from cDNA libraries (8)

Clone Accession Species Library Anatomy Stage
IMAGE:7679842 BC167598 X. tropicalis
TEgg014p07 CT030263 X. tropicalis
NM_001130331 X. tropicalis
XM_031896020 X. tropicalis
IMAGE:5542424 BC045101 X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:7007944 BC084767 X. laevis.S
NM_001094974 X. laevis.S
XM_041589082 X. laevis.L

ESTs (61)

Clone Accession 5'/3' Species Library Anatomy Stage
TTbA046i20 CR423789 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7698303 CX929868 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7719210 CX982324 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7553500 CX491455 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7612623 CX404924 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7688853 CX912045 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7658759 CX837530 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7801263 DR834466 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7660345 CX841074 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7661094 CX842713 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
TNeu012c19 AL639525 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu049m19 AL662089 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu119g12 AL792133 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7719210 CX982323 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7801263 DR834465 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
TGas142e07 BX762406 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7698303 CX929867 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7688853 CX912044 3' X. tropicalis NIH_XGC_tropTe4 testis frog
TNeu119g12 BX700731 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7612623 CX404923 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7658759 CX837529 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7660345 CX841073 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7553500 CX491454 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:5542424 BQ737431 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:6871262 CA983630 5' X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:7296185 CO386756 5' X. laevis.S Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
IMAGE:7298847 CO388441 5' X. laevis.S Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
IMAGE:7300347 CO390295 5' X. laevis.S Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
IMAGE:6636303 BU910492 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6636636 BU910766 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:5157326 CA793540 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6864390 CA987688 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
XL025l22 BJ033982 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL172k24 BJ615585 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL177j17 BJ616626 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL190f19 BJ619739 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL205g07 BJ623621 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL428o17ex BP678134 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL402o07ex BP678788 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL476e19ex BP695028 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
xlk112k09ex DC039644 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk135h17ex DC047016 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk4j23ex DC054107 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:6867164 CA982628 5' X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
IMAGp998D2212316 BX850580 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XL074e13 BJ061862 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL051j23 BJ069057 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:8530243 EB469497 5' X. laevis.S NICHD_XGC_int_m whole organism NF stage 56 to NF stage 62
IMAGE:8545864 EB471204 5' X. laevis.S NICHD_XGC_tail_m tail NF stage 56 to NF stage 62
IMAGE:8825238 EG571543 5' X. laevis.S NICHD_XGC_int_m whole organism NF stage 56 to NF stage 62
XL190f19 BJ636372 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL172k24 BJ632210 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL025l22 BJ049327 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:7296185 CO386747 3' X. laevis.S Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
XL074e13 BJ080033 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL051j23 BJ085971 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
rxlk4j23ex DC020725 3' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk135h17ex DC013807 3' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk112k09ex DC006723 3' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL476e19ex BP729060 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL402o07ex BP715753 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5