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Summary Expression Phenotypes Gene Literature (2) GO Terms (16) Nucleotides (115) Proteins (50) Interactants (250) Wiki
XB-GENEPAGE-5931109

Show:     All X. tropicalis X. laevis

Nucleotide sequences for hps5 - All

RefSeq mRNAs(12)
Models - Gene (22)
Models - mRNA (29)
mRNAs (13)
ESTs (16)

RefSeq mRNAs (12)

Accession Version Protein Name Length Protein Species
NM_001097257 NM_001097257.1 BLOC-2 complex member HPS5 5387 bp NP_001090726 X. tropicalis
XM_012956298 XM_012956298.3 Hermansky-Pudlak syndrome 5 protein isoform X1 5399 bp XP_012811752 X. tropicalis
XM_012956357 XM_012956357.3 Hermansky-Pudlak syndrome 5 protein isoform X1 5675 bp XP_012811811 X. tropicalis
XM_012956409 XM_012956409.3 Hermansky-Pudlak syndrome 5 protein isoform X1 5672 bp XP_012811863 X. tropicalis
XM_031893775 XM_031893775.1 XP_031749635.1 Hermansky-Pudlak syndrome 5 protein isoform X1 4936 bp XP_031749635 X. tropicalis
XM_031894045 XM_031894045.1 XP_031749905.1 Hermansky-Pudlak syndrome 5 protein isoform X1 4979 bp XP_031749905 X. tropicalis
XM_018265889 XM_018265889.2 Hermansky-Pudlak syndrome 5 protein 4919 bp XP_018121378 X. laevis.L
XM_018265895 XM_018265895.2 Hermansky-Pudlak syndrome 5 protein 5071 bp XP_018121384 X. laevis.L
XM_018265901 XM_018265901.2 Hermansky-Pudlak syndrome 5 protein 4916 bp XP_018121390 X. laevis.L
XM_041569208 XM_041569208.1 XP_041425142.1 Hermansky-Pudlak syndrome 5 protein 5068 bp XP_041425142 X. laevis.L
XM_041569214 XM_041569214.1 XP_041425148.1 Hermansky-Pudlak syndrome 5 protein 4603 bp XP_041425148 X. laevis.L
XM_041569220 XM_041569220.1 XP_041425154.1 Hermansky-Pudlak syndrome 5 protein 4469 bp XP_041425154 X. laevis.L

Models - Gene (22)

Source Version Model Species
NCBI 10.1 XBXL10_1g3166 X. laevis.L
NCBI 10.0 XBXT10g018801 X. tropicalis
ENSEMBL 10.0 hps5 X. tropicalis
Xenbase 9.2 gene10577 X. laevis.L
JGI 9.1 Xelaev18008250m.g X. laevis.L
Xenbase 9.1 gene6388 X. tropicalis
ENSEMBL 9.1 hps5 X. tropicalis
JGI 7.1 Xetro.A00212 X. tropicalis
JGI 6.0 XeXenL6RMv10022269m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000016685 X. tropicalis
JGI 4.1 estExt_Genewise1.C_870117 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_87000063 X. tropicalis
JGI 4.1 estExt_Genewise1.C_870074 X. tropicalis
JGI 4.1 e_gw1.87.38.1 X. tropicalis
JGI 4.1 e_gw1.87.74.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_870062 X. tropicalis
JGI 4.1 gw1.87.117.1 X. tropicalis
JGI 4.1 gw1.87.38.1 X. tropicalis
JGI 4.1 gw1.87.74.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_870031 X. tropicalis
JGI 4.1 estExt_Genewise1.C_870038 X. tropicalis
JGI 4.1 e_gw1.87.117.1 X. tropicalis

mRNAs based on gene models(29)

Source Version Model Species
NCBI 10.1 XBmRNA5734 X. laevis.L
NCBI 10.0 mRNA092875 X. tropicalis
ENSEMBL 10.0 ENSXETT00000069636 X. tropicalis
Xenbase 9.2 rna30734 X. laevis.L
ENSEMBL 9.1 ENSXETT00000036381 X. tropicalis
Xenbase 9.1 rna20636 X. tropicalis
ENSEMBL 9.1 ENSXETT00000069636 X. tropicalis
ENSEMBL 9.1 ENSXETT00000074190 X. tropicalis
ENSEMBL 9.1 ENSXETT00000097270 X. tropicalis
ENSEMBL 9.1 ENSXETT00000036384 X. tropicalis
JGI 9.1 Xelaev18008250m X. laevis.L
JGI 7.1 Xetro.A00212.1 X. tropicalis
JGI 7.1 Xetro.A00212.2 X. tropicalis
JGI 6.0 XeXenL6RMv10022269m X. laevis.L
JGI 4.1 gw1.87.74.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_870038 X. tropicalis
JGI 4.1 e_gw1.87.38.1 X. tropicalis
JGI 4.1 e_gw1.87.74.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000036381 X. tropicalis
ENSEMBL 4.1 ENSXETT00000036384 X. tropicalis
ENSEMBL 4.1 ENSXETT00000036385 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_870062 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_870031 X. tropicalis
JGI 4.1 e_gw1.87.117.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_870074 X. tropicalis
JGI 4.1 estExt_Genewise1.C_870117 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_87000063 X. tropicalis
JGI 4.1 gw1.87.117.1 X. tropicalis
JGI 4.1 gw1.87.38.1 X. tropicalis

mRNAs from cDNA libraries (13)

Clone Accession Species Library Anatomy Stage
IMAGE:7680870 BC127308 X. tropicalis
NM_001097257 X. tropicalis
XM_012956298 X. tropicalis
XM_012956357 X. tropicalis
XM_012956409 X. tropicalis
XM_031893775 X. tropicalis
XM_031894045 X. tropicalis
XM_018265889 X. laevis.L
XM_018265895 X. laevis.L
XM_018265901 X. laevis.L
XM_041569208 X. laevis.L
XM_041569214 X. laevis.L
XM_041569220 X. laevis.L

ESTs (16)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7617653 CX361957 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7671355 CX878848 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:8955480 EL660938 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
IMAGE:8853608 EL815626 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
THdA019g16 CR571665 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:8858246 EL822318 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
TNeu141i24 AL796605 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7627130 CX381110 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
THdA007g10 CR560272 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:8858246 EL822319 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
THdA007g10 CR560273 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA019g16 CR571666 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7627130 CX381109 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7617653 DR897293 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7671355 CX878847 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:8853608 EL815627 3' X. tropicalis NICHD_XGC_tropTe1 testis frog