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Summary Expression Phenotypes Gene Literature (0) GO Terms (4) Nucleotides (192) Proteins (48) Interactants (25) Wiki
XB-GENEPAGE-5914495

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for pomp - Xenopus tropicalis

RefSeq mRNAs(1)
Models - Gene (24)
Models - mRNA (26)
mRNAs (3)
ESTs (64)

RefSeq mRNAs (1)

Accession Version name Length Protein Species
NM_001005093 NM_001005093.2 proteasome maturation protein 754 bp NP_001005093 X. tropicalis

Models - Gene (24)

Source Version Model Species
NCBI 10.0 XBXT10g012054 X. tropicalis
ENSEMBL 10.0 pomp X. tropicalis
Xenbase 9.1 gene2083 X. tropicalis
ENSEMBL 9.1 pomp X. tropicalis
ENSEMBL 9.1 slc33a1 X. tropicalis
JGI 8.0 Xetrov14045434m.g X. tropicalis
JGI 7.1 Xetro.F01887 X. tropicalis
ENSEMBL 4.1 ENSXETG00000026990 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3330030 X. tropicalis
JGI 4.1 e_gw1.333.189.1 X. tropicalis
JGI 4.1 e_gw1.333.190.1 X. tropicalis
JGI 4.1 e_gw1.333.43.1 X. tropicalis
JGI 4.1 gw1.333.189.1 X. tropicalis
JGI 4.1 gw1.333.190.1 X. tropicalis
JGI 4.1 gw1.333.43.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3330028 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3330043 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3330189 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3330190 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_3330006 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_333000002 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_333000003 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_333000006 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_333000030 X. tropicalis

mRNAs based on gene models(26)

Source Version Model Species
NCBI 10.0 mRNA059772 X. tropicalis
ENSEMBL 10.0 ENSXETT00000107029 X. tropicalis
ENSEMBL 10.0 ENSXETT00000086985 X. tropicalis
Xenbase 9.1 rna6832 X. tropicalis
ENSEMBL 9.1 ENSXETT00000026912 X. tropicalis
ENSEMBL 9.1 ENSXETT00000086985 X. tropicalis
ENSEMBL 9.1 ENSXETT00000056618 X. tropicalis
JGI 8.0 Xetrov14045434m X. tropicalis
JGI 7.1 Xetro.F01887.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_3330030 X. tropicalis
ENSEMBL 4.1 ENSXETT00000056618 X. tropicalis
JGI 4.1 e_gw1.333.189.1 X. tropicalis
JGI 4.1 e_gw1.333.190.1 X. tropicalis
JGI 4.1 e_gw1.333.43.1 X. tropicalis
JGI 4.1 gw1.333.189.1 X. tropicalis
JGI 4.1 gw1.333.190.1 X. tropicalis
JGI 4.1 gw1.333.43.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_3330028 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3330043 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3330189 X. tropicalis
JGI 4.1 estExt_Genewise1.C_3330190 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_3330006 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_333000002 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_333000003 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_333000006 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_333000030 X. tropicalis

mRNAs from cDNA libraries (3)

Clone Accession Species Library Anatomy Stage
NM_001005093 X. tropicalis
TGas049e06 CR855731 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7028453 BC077023 X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30

ESTs (64)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:9017693 EL865768 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:9010840 EL855455 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8890616 EL850709 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8888673 EL847047 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8907398 EL801075 5' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:8924041 EL669178 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8863130 EL710557 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8867463 EL706408 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8961788 EL654720 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
xtbs06F23 CN092380 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs25C21 CN085076 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs15P24 CN079089 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
st16p06 DC167674 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st15p06 DC167376 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
XZT12264 CX320554 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
XZT10783 CX310636 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7553290 CX491652 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7599544 CX344037 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7845971 DT528600 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7551401 CX510601 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7691571 CX916907 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7519695 CX479353 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7529663 CX426329 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
THdA042n14 CR584648 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA042n12 CR584646 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA038n14 CR573452 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
xthr42A14 CN115128 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr31C24 CN108080 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TGas141j08 AL957981 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas030i12 AL649817 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas049e06 AL649564 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu092b05 BX696033 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu142k04 AL795721 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu057b13 AL677556 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu062h04 AL673676 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7028453 CF786256 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
IMAGE:9017693 EL865769 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:9010840 EL855456 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8890616 EL850710 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8888673 EL847048 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8907398 EL801076 3' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:8924041 EL669177 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8863130 EL710556 3' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8867463 EL706407 3' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
xtbs06F23 CN092379 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs25C21 CN085075 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs15P24 CN079088 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
rst16p06 DC137604 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst15p06 DC137315 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7599544 CX344036 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7845971 DT528599 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7691571 CX916906 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7551401 CX510600 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7553290 CX491651 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7519695 CX479352 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
THdA042n14 CR584649 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA042n12 CR584647 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
xthr42A14 CN115127 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr31C24 CN108079 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TTpA013l19 BX731375 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TNeu092b05 BX696034 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu062h04 BX686260 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu057b13 BX683859 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:4462051 BG885473 3' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12