Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (0) GO Terms (3) Nucleotides (191) Proteins (62) Interactants (0) Wiki
XB-GENEPAGE-5901009

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for XB5901009 - All

RefSeq mRNAs(4)
Models - Gene (25)
Models - mRNA (36)
mRNAs (16)
ESTs (58)

RefSeq mRNAs (4)

Accession Version name Length Protein Species
NM_001015901 NM_001015901.3 uncharacterized protein LOC548655 2993 bp NP_001015901 X. tropicalis
XM_041580860 XM_041580860.1 XP_041436794.1 uncharacterized protein LOC379722 isoform X1 3243 bp XP_041436794 X. laevis.L
XM_041580861 XM_041580861.1 XP_041436795.1 uncharacterized protein LOC379722 isoform X2 3105 bp XP_041436795 X. laevis.L
NM_001086561 NM_001086561.1 CYFIP-related Rac1 interactor A-like 3014 bp NP_001080030 X. laevis.L

Models - Gene (25)

Source Version Model Species
NCBI 10.0 XBXT10g015202 X. tropicalis
NCBI 10.1 XBXL10_1g7395 X. laevis.L
Xenbase 9.2 gene15968 X. laevis.S
ENSEMBL 10.0 XB5901009 [provisional] X. tropicalis
JGI 9.1 Xelaev18012636m.g X. laevis.L
JGI 9.1 Xelaev18004070m.g X. laevis.S
Xenbase 9.1 gene603 X. tropicalis
Xenbase 9.2 gene40891 X. laevis.L
ENSEMBL 9.1 XB5901009 X. tropicalis
JGI 8.0 Xetrov14008648m.g X. tropicalis
JGI 7.1 Xetro.B00290 X. tropicalis
JGI 7.2 Xelaev16038396m.g X. laevis.L
JGI 6.0 XeXenL6RMv10024828m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000010951 X. tropicalis
JGI 4.1 e_gw1.817.26.1 X. tropicalis
JGI 4.1 e_gw1.817.36.1 X. tropicalis
JGI 4.1 e_gw1.817.8.1 X. tropicalis
JGI 4.1 gw1.817.26.1 X. tropicalis
JGI 4.1 gw1.817.36.1 X. tropicalis
JGI 4.1 gw1.817.8.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_8170004 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_8170013 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_817000004 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_817000014 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_817000015 X. tropicalis

mRNAs based on gene models(36)

Source Version Model Species
NCBI 10.0 mRNA075164 X. tropicalis
NCBI 10.1 XBmRNA13934 X. laevis.L
ENSEMBL 10.0 ENSXETT00000023936 X. tropicalis
ENSEMBL 10.0 ENSXETT00000105092 X. tropicalis
JGI 9.1 Xelaev18012636m X. laevis.L
JGI 9.1 Xelaev18004070m X. laevis.S
Xenbase 9.1 rna1872 X. tropicalis
Xenbase 9.2 rna46682 X. laevis.S
Xenbase 9.2 rna83094 X. laevis.L
ENSEMBL 9.1 ENSXETT00000087372 X. tropicalis
ENSEMBL 9.1 ENSXETT00000104404 X. tropicalis
ENSEMBL 9.1 ENSXETT00000076429 X. tropicalis
ENSEMBL 9.1 ENSXETT00000023936 X. tropicalis
ENSEMBL 9.1 ENSXETT00000081606 X. tropicalis
ENSEMBL 9.1 ENSXETT00000069473 X. tropicalis
ENSEMBL 9.1 ENSXETT00000023934 X. tropicalis
ENSEMBL 9.1 ENSXETT00000105092 X. tropicalis
JGI 8.0 Xetrov14008648m X. tropicalis
JGI 7.1 Xetro.B00290.3 X. tropicalis
JGI 7.1 Xetro.B00290.2 X. tropicalis
JGI 7.1 Xetro.B00290.1 X. tropicalis
JGI 7.2 Xelaev16038396m X. laevis.L
JGI 6.0 XeXenL6RMv10024828m X. laevis.L
JGI 4.1 e_gw1.817.26.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000023934 X. tropicalis
ENSEMBL 4.1 ENSXETT00000023936 X. tropicalis
JGI 4.1 e_gw1.817.36.1 X. tropicalis
JGI 4.1 e_gw1.817.8.1 X. tropicalis
JGI 4.1 gw1.817.26.1 X. tropicalis
JGI 4.1 gw1.817.36.1 X. tropicalis
JGI 4.1 gw1.817.8.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_8170004 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_8170013 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_817000004 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_817000014 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_817000015 X. tropicalis

mRNAs from cDNA libraries (16)

Clone Accession Species Library Anatomy Stage
NM_001015901 X. tropicalis
TTpA012b12 CR926444 X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7660302 BC121209 X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7598173 BC135124 X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
XM_012956912 X. tropicalis
XM_012956911 X. tropicalis
XM_012956910 X. tropicalis
XM_012956909 X. tropicalis
XM_012956908 X. tropicalis
HQ171202 X. tropicalis
IMAGE:4969173 BC059337 X. laevis.L
NM_001086561 X. laevis.L
XM_018244799 X. laevis.L
XM_018244798 X. laevis.L
XM_041580861 X. laevis.L
XM_041580860 X. laevis.L

ESTs (58)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:9018862 EL867783 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8927926 EL676036 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8958836 EL661141 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
xtbs33M19 CN090316 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs31M13 CN089148 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs25L12 CN085563 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs05N17 CN074789 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs02H21 CN072913 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7787423 CX329731 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7786212 CX327673 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7626176 CX379733 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7615222 CX391674 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7604662 CX412064 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7598173 CX387604 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7745435 DN039583 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7671650 CX879889 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7666551 CX852570 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7665711 CX851405 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7663158 CX846262 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7662108 CX844174 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7661900 CX844040 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7660302 CX841104 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7655996 CX826628 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
THdA036c04 CR581102 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA036c02 CR577366 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA017m23 CR568331 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA015o03 CR566127 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTpA029k08 BX716850 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA012b12 BX707104 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:9018862 EL867784 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8927926 EL676035 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
xtbs33M19 CN090315 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs31M13 CN089147 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs25L12 CN085562 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs05N17 CN074788 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7786212 CX327672 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7671650 CX879888 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7666551 CX852569 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7662108 CX844173 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7661900 CX844039 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7660302 CX841103 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7615222 DR896628 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7598173 DR891882 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7672802 CX881925 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7665711 CX851404 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7663158 CX846261 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7655996 CX826627 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7626176 CX379732 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7787423 CX329730 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
THdA036c04 CR581103 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA036c02 CR577367 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA017m23 CR568332 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTpA029k08 BX716851 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA012b12 BX707105 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:8640101 EB732325 5' X. laevis.L NICHD_XGC_skin_m skin unspecified stage
IMAGE:6877333 CB206149 5' X. laevis.L NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
IMAGE:6877333 CB756499 3' X. laevis.L NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
IMAGE:6877333 CB755802 3' X. laevis.L NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage