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Summary Expression Phenotypes Gene Literature (0) GO Terms (9) Nucleotides (195) Proteins (86) Interactants (0) Wiki
XB-GENEPAGE-5900246

Show:     All X. tropicalis X. laevis

Nucleotide sequences for c3h17orf49 - All

RefSeq mRNAs(15)
Models - Gene (38)
Models - mRNA (43)
mRNAs (18)
ESTs (54)

RefSeq mRNAs (15)

Accession Version Protein Name Length Protein Species
NM_001078721 NM_001078721.1 chromatin complexes subunit BAP18 1108 bp NP_001072189 X. tropicalis
XM_012953409 XM_012953409.3 chromatin complexes subunit BAP18 isoform X1 1159 bp XP_012808863 X. tropicalis
XM_012953410 XM_012953410.3 chromatin complexes subunit BAP18 isoform X3 1087 bp XP_012808864 X. tropicalis
XM_018092148 XM_018092148.2 chromatin complexes subunit BAP18 isoform X2 1161 bp XP_017947637 X. tropicalis
XM_018092149 XM_018092149.2 chromatin complexes subunit BAP18 isoform X4 1085 bp XP_017947638 X. tropicalis
NM_001091155 NM_001091155.1 uncharacterized protein LOC414580 1063 bp NP_001084624 X. laevis.S
XM_041587581 XM_041587581.1 XP_041443515.1 uncharacterized protein LOC414580 isoform X1 1168 bp XP_041443515 X. laevis.S
XM_041587582 XM_041587582.1 XP_041443516.1 uncharacterized protein LOC414580 isoform X2 1080 bp XP_041443516 X. laevis.S
XM_041587584 XM_041587584.1 XP_041443518.1 uncharacterized protein LOC414580 isoform X3 1037 bp XP_041443518 X. laevis.S
NM_001095462 NM_001095462.1 uncharacterized protein LOC496304 768 bp NP_001088931 X. laevis.L
XM_018251183 XM_018251183.2 uncharacterized protein LOC496304 isoform X2 1060 bp XP_018106672 X. laevis.L
XM_041585213 XM_041585213.1 XP_041441147.1 uncharacterized protein LOC496304 isoform X1 1071 bp XP_041441147 X. laevis.L
XM_041585214 XM_041585214.1 XP_041441148.1 uncharacterized protein LOC496304 isoform X3 1075 bp XP_041441148 X. laevis.L
XM_041585215 XM_041585215.1 XP_041441149.1 uncharacterized protein LOC496304 isoform X4 1060 bp XP_041441149 X. laevis.L
XM_041585216 XM_041585216.1 XP_041441150.1 uncharacterized protein LOC496304 isoform X5 980 bp XP_041441150 X. laevis.L

Models - Gene (38)

Source Version Model Species
NCBI 10.1 XBXL10_1g14302 X. laevis.L
NCBI 10.1 XBXL10_1g17232 X. laevis.S
NCBI 10.0 XBXT10g014011 X. tropicalis
ENSEMBL 10.0 c17orf49 X. tropicalis
Xenbase 9.2 gene36332 X. laevis.S
Xenbase 9.2 gene12051 X. laevis.L
JGI 9.1 Xelaev18019144m.g X. laevis.L
JGI 9.1 Xelaev18000844m.g X. laevis.S
Xenbase 9.1 gene7883 X. tropicalis
ENSEMBL 9.1 c17orf49 X. tropicalis
JGI 8.0 Xetrov14011714m.g X. tropicalis
JGI 7.2 Xelaev16051444m.g X. laevis.S
JGI 7.1 Xetro.K00745 X. tropicalis
JGI 6.0 XeXenL6RMv10013230m.g X. laevis.S
JGI 6.0 XeXenL6RMv10004125m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000017227 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_556000001 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5560004 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_556000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_556000004 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_556000005 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_556000002 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_556000002 X. tropicalis
JGI 4.1 e_gw1.556.107.1 X. tropicalis
JGI 4.1 e_gw1.556.120.1 X. tropicalis
JGI 4.1 e_gw1.556.19.1 X. tropicalis
JGI 4.1 gw1.556.107.1 X. tropicalis
JGI 4.1 gw1.556.120.1 X. tropicalis
JGI 4.1 gw1.556.19.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_5560003 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5560019 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5560107 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5560120 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_5560001 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_5560002 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5560003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5560005 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_5560002 X. tropicalis

mRNAs based on gene models(43)

Source Version Model Species
NCBI 10.1 XBmRNA31936 X. laevis.S
NCBI 10.1 XBmRNA26976 X. laevis.L
ENSEMBL 10.0 ENSXETT00000122507 X. tropicalis
NCBI 10.0 mRNA069345 X. tropicalis
ENSEMBL 10.0 ENSXETT00000103949 X. tropicalis
ENSEMBL 10.0 ENSXETT00000037525 X. tropicalis
Xenbase 9.2 rna76613 X. laevis.S
Xenbase 9.2 rna35008 X. laevis.L
JGI 9.1 Xelaev18019144m X. laevis.L
ENSEMBL 9.1 ENSXETT00000037525 X. tropicalis
ENSEMBL 9.1 ENSXETT00000103949 X. tropicalis
Xenbase 9.1 rna25447 X. tropicalis
JGI 9.1 Xelaev18000844m X. laevis.S
JGI 8.0 Xetrov14011714m X. tropicalis
JGI 7.2 Xelaev16051444m X. laevis.S
JGI 7.1 Xetro.K00745.1 X. tropicalis
JGI 7.1 Xetro.K00745.2 X. tropicalis
JGI 6.0 XeXenL6RMv10004125m X. laevis.S
JGI 6.0 XeXenL6RMv10013230m X. laevis.S
JGI 4.1 fgenesh1_pg.C_scaffold_556000005 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_556000002 X. tropicalis
JGI 4.1 e_gw1.556.107.1 X. tropicalis
JGI 4.1 gw1.556.120.1 X. tropicalis
JGI 4.1 gw1.556.19.1 X. tropicalis
JGI 4.1 gw1.556.107.1 X. tropicalis
JGI 4.1 e_gw1.556.120.1 X. tropicalis
JGI 4.1 e_gw1.556.19.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000037525 X. tropicalis
ENSEMBL 4.1 ENSXETT00000037526 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_5560001 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_5560002 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5560003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5560004 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5560005 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_5560002 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_5560003 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5560019 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5560107 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5560120 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_556000001 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_556000002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_556000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_556000004 X. tropicalis

mRNAs from cDNA libraries (18)

Clone Accession Species Library Anatomy Stage
IMAGE:7658239 BC118723 X. tropicalis NIH_XGC_tropBrn3 brain frog
NM_001078721 X. tropicalis
XM_012953409 X. tropicalis
XM_012953410 X. tropicalis
XM_018092148 X. tropicalis
XM_018092149 X. tropicalis
IMAGE:6317107 BC068688 X. laevis.S
NM_001091155 X. laevis.S
XM_041587581 X. laevis.S
XM_041587582 X. laevis.S
XM_041587584 X. laevis.S
IMAGE:3744453 BC088821 X. laevis.L Xenopus laevis unfertilized egg cDNA library egg unfertilized egg stage
NM_001095462 X. laevis.L
XM_018251183 X. laevis.L
XM_041585213 X. laevis.L
XM_041585214 X. laevis.L
XM_041585215 X. laevis.L
XM_041585216 X. laevis.L

ESTs (54)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7091782 CK654058 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
IMAGE:7522181 CX471012 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7795548 CX780556 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7795498 CX780186 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7017230 CF524528 5' X. tropicalis NICHD_XGC_Swb1 whole organism frog
TTbA020n13 CR423950 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTpA022f10 BX703393 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA007h04 BX705274 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA067p18 BX716180 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:8922930 EL675488 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
TNeu047f24 AL659687 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7600906 DR892718 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7627533 DR900070 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TNeu089i04 AL785237 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu130d04 AL798036 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7854531 DT395955 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7674808 CX885196 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:8872047 EL699182 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
st6e04 DC174791 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:6991898 CF240045 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:6992666 CF241428 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:8883510 EL838956 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
TGas004i09 AL595765 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7658239 CX836517 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7027381 CF784279 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
IMAGE:7576292 CX432098 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7854531 DT395954 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
rst6e04 DC144470 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7027381 CF784278 3' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
IMAGE:7091782 CN325055 3' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
TNeu089i04 BX693815 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu089l16 BX698763 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu062c17 BX700187 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu130d04 BX700456 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:6992666 CF241429 3' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:7576292 CX432097 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7522181 CX471011 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7600906 CX364084 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7627533 CX381159 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7795548 CX780042 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7795498 CX780642 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7658239 CX836516 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:8872047 EL699181 3' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8922930 EL675487 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8883510 EL838957 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
PBX0110F07 AW641810 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3402288 BG037882 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
PBX0088B02 AW639927 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
p12f10 AU245184 5' X. laevis.S Shibata Xenopus AEM lambda-ZAP II cDNA library endomesoderm NF stage 12.5 to NF stage 13
xl301a08 DC123374 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:6322678 CA971330 5' X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
XL481f21ex BP697355 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL481f21ex BP730643 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:6874094 CB563610 3' X. laevis.S NICHD_XGC_Tad2 whole organism NF stage 62