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Summary Expression Phenotypes Gene Literature (5) GO Terms (2) Nucleotides (207) Proteins (56) Interactants (7) Wiki
XB-GENEPAGE-5898341

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for 42sp43 - Xenopus tropicalis

RefSeq mRNAs(2)
Models - Gene (26)
Models - mRNA (34)
mRNAs (3)
ESTs (32)

RefSeq mRNAs (2)

Accession Version name Length Protein Species
NM_001016094 NM_001016094.2 P43 5S RNA-binding protein 1394 bp NP_001016094 X. tropicalis
XM_012971757 XM_012971757.3 P43 5S RNA-binding protein isoform X1 1349 bp XP_012827211 X. tropicalis

Models - Gene (26)

Source Version Model Species
NCBI 10.0 XBXT10g005857 X. tropicalis
ENSEMBL 10.0 42Sp43 X. tropicalis
Xenbase 9.1 gene1894 X. tropicalis
ENSEMBL 9.1 42Sp43 X. tropicalis
JGI 8.0 Xetrov14041393m.g X. tropicalis
JGI 7.1 Xetro.J00795 X. tropicalis
ENSEMBL 4.1 ENSXETG00000023710 X. tropicalis
JGI 4.1 e_gw1.686.60.1 X. tropicalis
JGI 4.1 e_gw1.686.21.1 X. tropicalis
JGI 4.1 e_gw1.686.61.1 X. tropicalis
JGI 4.1 gw1.686.21.1 X. tropicalis
JGI 4.1 gw1.686.60.1 X. tropicalis
JGI 4.1 gw1.686.61.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_6860009 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6860021 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6860060 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6860061 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_6860005 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_6860015 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_6860016 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_6860007 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_686000002 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_686000003 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_686000005 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_686000015 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_686000016 X. tropicalis

mRNAs based on gene models(34)

Source Version Model Species
NCBI 10.0 mRNA028991 X. tropicalis
ENSEMBL 10.0 ENSXETT00000115424 X. tropicalis
ENSEMBL 10.0 ENSXETT00000112882 X. tropicalis
ENSEMBL 10.0 ENSXETT00000061422 X. tropicalis
ENSEMBL 10.0 ENSXETT00000051151 X. tropicalis
Xenbase 9.1 rna6187 X. tropicalis
ENSEMBL 9.1 ENSXETT00000061422 X. tropicalis
ENSEMBL 9.1 ENSXETT00000069004 X. tropicalis
ENSEMBL 9.1 ENSXETT00000051151 X. tropicalis
JGI 8.0 Xetrov14041393m X. tropicalis
JGI 7.1 Xetro.J00795.3 X. tropicalis
JGI 7.1 Xetro.J00795.4 X. tropicalis
JGI 7.1 Xetro.J00795.2 X. tropicalis
JGI 7.1 Xetro.J00795.1 X. tropicalis
JGI 4.1 e_gw1.686.60.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000051151 X. tropicalis
JGI 4.1 e_gw1.686.21.1 X. tropicalis
JGI 4.1 e_gw1.686.61.1 X. tropicalis
JGI 4.1 gw1.686.21.1 X. tropicalis
JGI 4.1 gw1.686.60.1 X. tropicalis
JGI 4.1 gw1.686.61.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_6860009 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6860021 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6860060 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6860061 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_6860005 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_6860015 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_6860016 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_6860007 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_686000002 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_686000003 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_686000005 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_686000015 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_686000016 X. tropicalis

mRNAs from cDNA libraries (3)

Clone Accession Species Library Anatomy Stage
NM_001016094 X. tropicalis
TGas064d12 CR762177 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
XM_012971757 X. tropicalis

ESTs (32)

Clone Accession 5'/3' Species Library Anatomy Stage
st49g15 DC178919 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st50g15 DC179138 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7579880 CX419174 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7545696 CX488370 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7539245 CX451516 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7534399 CX428571 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7569777 CX453613 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7520986 CX469394 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas109b04 AL970545 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas134n17 AL964627 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas035o15 AL649196 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas013o13 AL634283 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas002f19 AL595026 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu130e14 AL797885 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas064d12 AL679245 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas063d12 AL679066 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu029b13 AL646699 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:5382084 BQ393106 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:4461772 BG816445 5' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
rst50g15 DC148853 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst49g15 DC148642 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7545696 CX488369 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7520986 CX469393 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7540919 CX462739 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7569777 CX453612 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7539245 CX451515 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7534399 CX428570 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7579880 CX419173 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas064d12 BX745611 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu130e14 BX700477 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:5382084 BQ393105 3' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:4461772 BG816484 3' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12