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Summary Expression Phenotypes Gene Literature (1) GO Terms (10) Nucleotides (153) Proteins (56) Interactants (192) Wiki
XB-GENEPAGE-5897109

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for pus3 - Xenopus tropicalis

RefSeq mRNAs(1)
Models - Gene (23)
Models - mRNA (29)
mRNAs (8)
ESTs (25)

RefSeq mRNAs (1)

Accession Version name Length Protein Species
NM_203638 NM_203638.1 tRNA pseudouridine(38/39) synthase 2153 bp NP_988969 X. tropicalis

Models - Gene (23)

Source Version Model Species
NCBI 10.0 XBXT10g008459 X. tropicalis
ENSEMBL 10.0 pus3 X. tropicalis
Xenbase 9.1 gene3753 X. tropicalis
ENSEMBL 9.1 pus3 X. tropicalis
JGI 8.0 Xetrov14050806m.g X. tropicalis
JGI 7.1 Xetro.I01622 X. tropicalis
ENSEMBL 4.1 ENSXETG00000024532 X. tropicalis
JGI 4.1 e_gw1.645.4.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_6450021 X. tropicalis
JGI 4.1 e_gw1.645.68.1 X. tropicalis
JGI 4.1 e_gw1.645.89.1 X. tropicalis
JGI 4.1 gw1.645.4.1 X. tropicalis
JGI 4.1 gw1.645.68.1 X. tropicalis
JGI 4.1 gw1.645.89.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6450004 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6450068 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6450089 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_6450011 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_6450028 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_645000006 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_645000007 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_645000011 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_645000028 X. tropicalis

mRNAs based on gene models(29)

Source Version Model Species
NCBI 10.0 mRNA041927 X. tropicalis
ENSEMBL 10.0 ENSXETT00000052966 X. tropicalis
Xenbase 9.1 rna12277 X. tropicalis
ENSEMBL 9.1 ENSXETT00000052966 X. tropicalis
JGI 8.0 Xetrov14050806m X. tropicalis
JGI 7.1 Xetro.I01622.2 X. tropicalis
JGI 7.1 Xetro.I01622.5 X. tropicalis
JGI 7.1 Xetro.I01622.7 X. tropicalis
JGI 7.1 Xetro.I01622.4 X. tropicalis
JGI 7.1 Xetro.I01622.6 X. tropicalis
JGI 7.1 Xetro.I01622.3 X. tropicalis
JGI 7.1 Xetro.I01622.1 X. tropicalis
JGI 4.1 e_gw1.645.4.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000052966 X. tropicalis
JGI 4.1 e_gw1.645.68.1 X. tropicalis
JGI 4.1 e_gw1.645.89.1 X. tropicalis
JGI 4.1 gw1.645.4.1 X. tropicalis
JGI 4.1 gw1.645.68.1 X. tropicalis
JGI 4.1 gw1.645.89.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_6450021 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6450004 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6450068 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6450089 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_6450011 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_6450028 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_645000006 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_645000007 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_645000011 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_645000028 X. tropicalis

mRNAs from cDNA libraries (8)

Clone Accession Species Library Anatomy Stage
NM_203638 X. tropicalis
TEgg062e21 CR761247 X. tropicalis
TGas104p08 CR848155 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:5384629 BC061416 X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
XM_018097064 X. tropicalis
XM_012970247 X. tropicalis
XM_012970246 X. tropicalis
XM_012970245 X. tropicalis

ESTs (25)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8927804 EL675851 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
st84f20 DC187563 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st55e10 DC180288 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7788552 CX333799 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7579812 CX419036 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7564567 CX474927 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7558020 CX496908 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7733836 DN018254 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7528769 CX425571 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA064m13 CR449455 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas097l04 AL971057 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas104p08 AL958730 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA069a23 BX722312 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:5384629 BQ397282 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:8927804 EL675850 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
rst84f20 DC157430 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst55e10 DC150002 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7579812 CX419035 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7733836 DN018253 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7558020 CX496907 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7564567 CX474926 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7788552 CX333798 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TGas097l04 BX755273 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas104p08 BX754839 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:5384629 BQ397281 3' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19