Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (0) GO Terms (2) Nucleotides (82) Proteins (31) Interactants (1) Wiki
XB-GENEPAGE-5892880

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for sycn - All

RefSeq mRNAs(2)
Models - Gene (26)
Models - mRNA (26)
mRNAs (3)
ESTs (13)

RefSeq mRNAs (2)

Accession Version name Length Protein Species
NM_001113092 NM_001113092.1 syncollin precursor 534 bp NP_001106563 X. tropicalis
XM_041572922 XM_041572922.1 XP_041428856.1 syncollin-like 2644 bp XP_041428856 X. laevis.L

Models - Gene (26)

Source Version Model Species
NCBI 10.0 XBXT10g002198 X. tropicalis
NCBI 10.1 XBXL10_1g35547 X. laevis.L
ENSEMBL 10.0 sycn X. tropicalis
JGI 9.1 Xelaev18039266m.g X. laevis.L
Xenbase 9.1 gene4245 X. tropicalis
Xenbase 9.2 gene9570 X. laevis.L
ENSEMBL 9.1 sycn X. tropicalis
JGI 7.1 Xetro.H01081 X. tropicalis
JGI 6.0 XeXenL6RMv10018910m.g X. laevis.L
JGI 4.1 estExt_fgenesh1_pg.C_7460007 X. tropicalis
JGI 4.1 e_gw1.746.29.1 X. tropicalis
JGI 4.1 e_gw1.746.33.1 X. tropicalis
JGI 4.1 e_gw1.746.39.1 X. tropicalis
JGI 4.1 gw1.746.29.1 X. tropicalis
JGI 4.1 gw1.746.33.1 X. tropicalis
JGI 4.1 gw1.746.39.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_7460005 X. tropicalis
JGI 4.1 estExt_Genewise1.C_7460029 X. tropicalis
JGI 4.1 estExt_Genewise1.C_7460033 X. tropicalis
JGI 4.1 estExt_Genewise1.C_7460039 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_7460001 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_7460006 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_7460002 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_746000001 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_746000006 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_746000007 X. tropicalis

mRNAs based on gene models(26)

Source Version Model Species
NCBI 10.0 mRNA011108 X. tropicalis
NCBI 10.1 XBmRNA67124 X. laevis.L
ENSEMBL 10.0 ENSXETT00000066276 X. tropicalis
JGI 9.1 Xelaev18039266m X. laevis.L
Xenbase 9.1 rna13853 X. tropicalis
Xenbase 9.2 rna27850 X. laevis.L
ENSEMBL 9.1 ENSXETT00000066276 X. tropicalis
JGI 7.1 Xetro.H01081.1 X. tropicalis
JGI 6.0 XeXenL6RMv10018910m X. laevis.L
JGI 4.1 estExt_fgenesh1_pg.C_7460007 X. tropicalis
JGI 4.1 e_gw1.746.29.1 X. tropicalis
JGI 4.1 e_gw1.746.33.1 X. tropicalis
JGI 4.1 e_gw1.746.39.1 X. tropicalis
JGI 4.1 gw1.746.29.1 X. tropicalis
JGI 4.1 gw1.746.33.1 X. tropicalis
JGI 4.1 gw1.746.39.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_7460005 X. tropicalis
JGI 4.1 estExt_Genewise1.C_7460029 X. tropicalis
JGI 4.1 estExt_Genewise1.C_7460033 X. tropicalis
JGI 4.1 estExt_Genewise1.C_7460039 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_7460001 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_7460006 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_7460002 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_746000001 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_746000006 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_746000007 X. tropicalis

mRNAs from cDNA libraries (3)

Clone Accession Species Library Anatomy Stage
IMAGE:7740842 BC155008 X. tropicalis NIH_XGC_tropLiv1 liver frog
NM_001113092 X. tropicalis
XM_041572922 X. laevis.L

ESTs (13)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8877488 EL770228 5' X. tropicalis NICHD_XGC_tropPanc1 pancreas frog
IMAGE:7620233 CX347752 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7568680 CX457049 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7742800 DN034964 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7740842 DN031470 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7739205 DN028237 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:8877488 EL770227 3' X. tropicalis NICHD_XGC_tropPanc1 pancreas frog
IMAGE:8874089 EL764508 3' X. tropicalis NICHD_XGC_tropPanc1 pancreas frog
IMAGE:7620233 CX347751 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7648648 CX808070 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7742800 DN034963 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7740842 DN031469 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7739205 DN028236 3' X. tropicalis NIH_XGC_tropLiv1 liver frog