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Summary Expression Phenotypes Gene Literature (0) GO Terms (15) Nucleotides (178) Proteins (56) Interactants (17) Wiki
XB-GENEPAGE-5883748

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for kdm3b - Xenopus tropicalis

RefSeq mRNAs(2)
Models - Gene (20)
Models - mRNA (29)
mRNAs (4)
ESTs (46)

RefSeq mRNAs (2)

Accession Version name Length Protein Species
XM_002936848 XM_002936848.5 lysine-specific demethylase 3B isoform X1 7025 bp XP_002936894 X. tropicalis
XM_004912889 XM_004912889.4 lysine-specific demethylase 3B isoform X2 7022 bp XP_004912946 X. tropicalis

Models - Gene (20)

Source Version Model Species
NCBI 10.0 XBXT10g007211 X. tropicalis
ENSEMBL 10.0 kdm3b X. tropicalis
Xenbase 9.1 gene2068 X. tropicalis
ENSEMBL 9.1 kdm3b X. tropicalis
JGI 7.1 Xetro.C01510 X. tropicalis
ENSEMBL 4.1 ENSXETG00000006700 X. tropicalis
JGI 4.1 e_gw1.243.49.1 X. tropicalis
JGI 4.1 e_gw1.243.119.1 X. tropicalis
JGI 4.1 e_gw1.243.48.1 X. tropicalis
JGI 4.1 gw1.243.119.1 X. tropicalis
JGI 4.1 gw1.243.48.1 X. tropicalis
JGI 4.1 gw1.243.49.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2430030 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2430048 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2430049 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2430119 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2430049 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2430017 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_243000049 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_243000017 X. tropicalis

mRNAs based on gene models(29)

Source Version Model Species
NCBI 10.0 mRNA035717 X. tropicalis
ENSEMBL 10.0 ENSXETT00000014664 X. tropicalis
Xenbase 9.1 rna6789 X. tropicalis
ENSEMBL 9.1 ENSXETT00000079235 X. tropicalis
ENSEMBL 9.1 ENSXETT00000014664 X. tropicalis
ENSEMBL 9.1 ENSXETT00000100467 X. tropicalis
ENSEMBL 9.1 ENSXETT00000103069 X. tropicalis
ENSEMBL 9.1 ENSXETT00000097962 X. tropicalis
ENSEMBL 9.1 ENSXETT00000088302 X. tropicalis
ENSEMBL 9.1 ENSXETT00000087621 X. tropicalis
JGI 7.1 Xetro.C01510.2 X. tropicalis
JGI 7.1 Xetro.C01510.1 X. tropicalis
JGI 4.1 e_gw1.243.49.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000014664 X. tropicalis
ENSEMBL 4.1 ENSXETT00000014665 X. tropicalis
ENSEMBL 4.1 ENSXETT00000014666 X. tropicalis
JGI 4.1 e_gw1.243.119.1 X. tropicalis
JGI 4.1 e_gw1.243.48.1 X. tropicalis
JGI 4.1 gw1.243.119.1 X. tropicalis
JGI 4.1 gw1.243.48.1 X. tropicalis
JGI 4.1 gw1.243.49.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2430030 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2430048 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2430049 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2430119 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2430049 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2430017 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_243000049 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_243000017 X. tropicalis

mRNAs from cDNA libraries (4)

Clone Accession Species Library Anatomy Stage
TGas123p01 CR761842 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7574287 BC157193 X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
XM_002936848 X. tropicalis
XM_004912889 X. tropicalis

ESTs (46)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:9010466 EL854937 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8883075 EL850636 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8889403 EL848378 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8864765 EL701661 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
st67k07 DC183350 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st17j05 DC167863 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st14f12 DC166896 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st13f12 DC166586 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
CAAO7777 CX941620 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7639059 CX384435 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7546584 CX499951 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7603844 CX395506 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7596918 CX337310 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7574287 CX440984 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7627647 DR900154 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7708274 CX961474 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7703140 CX939171 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7672693 CX881510 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7670766 CX878407 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7522546 CX471831 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA012g06 CR409793 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas095i16 AL968410 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas123p01 AL955748 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas079i16 AL775063 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:8889403 EL848379 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8864765 EL701660 3' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
rst67k07 DC153143 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst17i05 DC137761 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst14f12 DC136826 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst13f12 DC136514 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
CAAO7777 CX941619 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7627647 CX381200 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7708274 CX961473 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7703140 CX939170 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7672693 CX881509 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7670766 CX878406 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7639059 DR903672 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7546584 CX499950 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7522546 CX471830 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7574287 CX440983 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7603844 CX395505 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTbA012g06 CR409794 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas123p01 BX760194 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas079i16 BX751903 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas095i16 BX751427 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA047i22 BX730885 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40