Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (1) GO Terms (15) Nucleotides (164) Proteins (62) Interactants (223) Wiki
XB-GENEPAGE-5881750

Show:     All X. tropicalis X. laevis

Nucleotide sequences for cpsf1 - All

RefSeq mRNAs(7)
Models - Gene (45)
Models - mRNA (48)
mRNAs (10)
ESTs (40)

RefSeq mRNAs (7)

Accession Version Protein Name Length Protein Species
XM_031904651 XM_031904651.1 XP_031760511.1 cleavage and polyadenylation specificity factor subunit 1 isoform X1 4497 bp XP_031760511 X. tropicalis
XM_031904652 XM_031904652.1 XP_031760512.1 cleavage and polyadenylation specificity factor subunit 1 isoform X2 4494 bp XP_031760512 X. tropicalis
XM_041566765 XM_041566765.1 XP_041422699.1 cleavage and polyadenylation specificity factor subunit 1 isoform X1 4943 bp XP_041422699 X. laevis.L
XM_041566766 XM_041566766.1 XP_041422700.1 cleavage and polyadenylation specificity factor subunit 1 isoform X2 4940 bp XP_041422700 X. laevis.L
XM_041568099 XM_041568099.1 XP_041424033.1 cleavage and polyadenylation specificity factor subunit 1-like isoform X1 6236 bp XP_041424033 X. laevis.S
XM_041568100 XM_041568100.1 XP_041424034.1 cleavage and polyadenylation specificity factor subunit 1-like isoform X2 6233 bp XP_041424034 X. laevis.S
XM_041568101 XM_041568101.1 XP_041424035.1 cleavage and polyadenylation specificity factor subunit 1-like isoform X3 6098 bp XP_041424035 X. laevis.S

Models - Gene (45)

Source Version Model Species
NCBI 10.1 XBXL10_1g28459 X. laevis.L
NCBI 10.0 XBXT10g011143 X. tropicalis
NCBI 10.1 XBXL10_1g29941 X. laevis.S
ENSEMBL 10.0 cpsf1 X. tropicalis
Xenbase 9.2 gene37860 X. laevis.L
Xenbase 9.1 gene32258 X. tropicalis
JGI 8.0 Xetrov14051397m.g X. tropicalis
JGI 7.2 Xelaev16070775m.g X. laevis.L
JGI 7.1 Xetro.K03065 X. tropicalis
JGI 6.0 XeXenL6RMv10011108m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000007599 X. tropicalis
JGI 4.1 gw1.1288.49.1 X. tropicalis
JGI 4.1 gw1.1288.50.1 X. tropicalis
JGI 4.1 gw1.1288.51.1 X. tropicalis
JGI 4.1 e_gw1.1288.11.1 X. tropicalis
JGI 4.1 e_gw1.1288.12.1 X. tropicalis
JGI 4.1 e_gw1.1288.13.1 X. tropicalis
JGI 4.1 e_gw1.1288.21.1 X. tropicalis
JGI 4.1 e_gw1.1288.37.1 X. tropicalis
JGI 4.1 e_gw1.1288.4.1 X. tropicalis
JGI 4.1 e_gw1.1288.41.1 X. tropicalis
JGI 4.1 e_gw1.1288.46.1 X. tropicalis
JGI 4.1 e_gw1.1288.47.1 X. tropicalis
JGI 4.1 e_gw1.1288.48.1 X. tropicalis
JGI 4.1 e_gw1.1288.49.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_12880002 X. tropicalis
JGI 4.1 e_gw1.1288.51.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_12880002 X. tropicalis
JGI 4.1 estExt_Genewise1.C_12880037 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_12880001 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_12880001 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_1288000001 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_1288000002 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_1288000001 X. tropicalis
JGI 4.1 e_gw1.1288.50.1 X. tropicalis
JGI 4.1 gw1.1288.11.1 X. tropicalis
JGI 4.1 gw1.1288.12.1 X. tropicalis
JGI 4.1 gw1.1288.37.1 X. tropicalis
JGI 4.1 gw1.1288.13.1 X. tropicalis
JGI 4.1 gw1.1288.21.1 X. tropicalis
JGI 4.1 gw1.1288.4.1 X. tropicalis
JGI 4.1 gw1.1288.41.1 X. tropicalis
JGI 4.1 gw1.1288.46.1 X. tropicalis
JGI 4.1 gw1.1288.47.1 X. tropicalis
JGI 4.1 gw1.1288.48.1 X. tropicalis

mRNAs based on gene models(48)

Source Version Model Species
NCBI 10.1 XBmRNA56396 X. laevis.S
NCBI 10.1 XBmRNA53495 X. laevis.L
ENSEMBL 10.0 ENSXETT00000123638 X. tropicalis
ENSEMBL 10.0 ENSXETT00000106944 X. tropicalis
NCBI 10.0 mRNA055311 X. tropicalis
ENSEMBL 10.0 ENSXETT00000117382 X. tropicalis
ENSEMBL 10.0 ENSXETT00000122270 X. tropicalis
Xenbase 9.2 rna78735 X. laevis.L
Xenbase 9.1 rna61106 X. tropicalis
JGI 8.0 Xetrov14051397m X. tropicalis
JGI 7.2 Xelaev16070775m X. laevis.L
JGI 7.1 Xetro.K03065.1 X. tropicalis
JGI 6.0 XeXenL6RMv10011108m X. laevis.L
ENSEMBL 4.1 ENSXETT00000016533 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_12880001 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_12880002 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_12880001 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_12880002 X. tropicalis
JGI 4.1 estExt_Genewise1.C_12880037 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_1288000001 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_1288000002 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_1288000001 X. tropicalis
JGI 4.1 gw1.1288.11.1 X. tropicalis
JGI 4.1 gw1.1288.12.1 X. tropicalis
JGI 4.1 gw1.1288.13.1 X. tropicalis
JGI 4.1 gw1.1288.21.1 X. tropicalis
JGI 4.1 e_gw1.1288.11.1 X. tropicalis
JGI 4.1 gw1.1288.4.1 X. tropicalis
JGI 4.1 gw1.1288.41.1 X. tropicalis
JGI 4.1 gw1.1288.46.1 X. tropicalis
JGI 4.1 gw1.1288.47.1 X. tropicalis
JGI 4.1 gw1.1288.48.1 X. tropicalis
JGI 4.1 gw1.1288.49.1 X. tropicalis
JGI 4.1 gw1.1288.50.1 X. tropicalis
JGI 4.1 gw1.1288.51.1 X. tropicalis
JGI 4.1 gw1.1288.37.1 X. tropicalis
JGI 4.1 e_gw1.1288.12.1 X. tropicalis
JGI 4.1 e_gw1.1288.13.1 X. tropicalis
JGI 4.1 e_gw1.1288.21.1 X. tropicalis
JGI 4.1 e_gw1.1288.37.1 X. tropicalis
JGI 4.1 e_gw1.1288.4.1 X. tropicalis
JGI 4.1 e_gw1.1288.41.1 X. tropicalis
JGI 4.1 e_gw1.1288.46.1 X. tropicalis
JGI 4.1 e_gw1.1288.47.1 X. tropicalis
JGI 4.1 e_gw1.1288.48.1 X. tropicalis
JGI 4.1 e_gw1.1288.49.1 X. tropicalis
JGI 4.1 e_gw1.1288.50.1 X. tropicalis
JGI 4.1 e_gw1.1288.51.1 X. tropicalis

mRNAs from cDNA libraries (10)

Clone Accession Species Library Anatomy Stage
TNeu108p17 CR926223 X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas031f16 CU075666 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
XM_031904651 X. tropicalis
XM_031904652 X. tropicalis
IMAGE:4032917 BC060475 X. laevis.L
XM_041566765 X. laevis.L
XM_041566766 X. laevis.L
XM_041568099 X. laevis.S
XM_041568100 X. laevis.S
XM_041568101 X. laevis.S

ESTs (40)

Clone Accession 5'/3' Species Library Anatomy Stage
CAAO12543 CX963548 5' X. tropicalis NIH_XGC_tropTe5 testis frog
TNeu100f18 AL790294 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu108p17 AL790468 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas006c08 AL594305 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas031f16 AL650045 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas052j24 AL679961 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas066a04 AL682447 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas062c20 AL683288 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
CAAO10684 CX960117 5' X. tropicalis NIH_XGC_tropTe5 testis frog
TGas062c20 BX746296 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas066a04 BX745872 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas052j24 BX747791 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
CAAO10684 CX960116 3' X. tropicalis NIH_XGC_tropTe5 testis frog
CAAO12543 CX963547 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7977397 DR730284 5' X. laevis.L NICHD_XGC_Emb9 whole organism NF stage 17 to NF stage 19
IMAGE:3199755 AW767286 5' X. laevis.L Harland stage 19-23 whole organism NF stage 19 to NF stage 23
IMAGp998A047822 BX851442 5' X. laevis.L Harland stage 19-23 whole organism NF stage 19 to NF stage 23
xlk56h05ex DC034527 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL016b18 BJ032249 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:7977513 DR718122 5' X. laevis.L NICHD_XGC_Emb9 whole organism NF stage 17 to NF stage 19
IMAGE:7977639 DR721805 5' X. laevis.L NICHD_XGC_Emb9 whole organism NF stage 17 to NF stage 19
IMAGE:7980599 DR728768 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
XL190m11 BJ619845 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL448d01ex BP685120 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XENOPUS_SOURCE_ID:xlnoc003o14 AW200181 5' X. laevis.L Xenopus laevis oocyte oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
IMAGE:3437341 BF615548 5' X. laevis.L Wellcome CRC pRN3 oocyte oocyte unspecified stage
IMAGE:3379920 BE506764 5' X. laevis.L Wellcome CRC pSK animal cap animal cap NF stage 7 to NF stage 9
IMAGE:3517441 BG264299 5' X. laevis.L Kirschner embryo St10 14 whole organism NF stage 10 to NF stage 14
XL481o06ex BP697504 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL005p18 BJ031074 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL189f08 BJ619464 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL189m11 BJ619593 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XENOPUS_SOURCE_ID:xlnoc003o14 AW199505 3' X. laevis.L Xenopus laevis oocyte oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
IMAGE:7980599 DR728766 3' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
XL016b18 BJ047285 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL005p18 BJ046017 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
rxl253e23 DC075147 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL189f08 BJ636104 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:3379920 BE192047 3' X. laevis.L Wellcome CRC pSK animal cap animal cap NF stage 7 to NF stage 9
IMAGE:5162640 BQ398438 3' X. laevis.L Soares NXEG egg unfertilized egg stage