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Summary Expression Phenotypes Gene Literature (0) GO Terms (6) Nucleotides (161) Proteins (91) Interactants (41) Wiki
XB-GENEPAGE-5875738

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for capn3 - All

RefSeq mRNAs(7)
Models - Gene (30)
Models - mRNA (47)
mRNAs (19)
ESTs (11)

RefSeq mRNAs (7)

Accession Version name Length Protein Species
NM_001105269 calpain 3 L homeolog 1318 bp NP_001098739 X. laevis.L
XM_041574837 XP_041430771.1 calpain-3 isoform X1 2818 bp XP_041430771 X. laevis.S
XM_041574838 XP_041430772.1 calpain-3 isoform X2 2713 bp XP_041430772 X. laevis.S
XM_041574839 XP_041430773.1 calpain-3 isoform X3 2692 bp XP_041430773 X. laevis.S
XM_041574840 XP_041430774.1 calpain-3 isoform X4 2690 bp XP_041430774 X. laevis.S
XM_041574841 XP_041430775.1 calpain-3 isoform X5 2564 bp XP_041430775 X. laevis.S
XM_041574842 XP_041430776.1 calpain-3 isoform X6 765 bp XP_041430776 X. laevis.S

Models - Gene (30)

Source Version Model Species
NCBI 10.0 XBXT10g006510 X. tropicalis
NCBI 10.1 XBXL10_1g36117 X. laevis.L
NCBI 10.1 XBXL10_1g37137 X. laevis.S
ENSEMBL 10.0 capn3 X. tropicalis
JGI 9.1 Xelaev18039947m.g X. laevis.L
JGI 9.1 Xelaev18041044m.g X. laevis.S
Xenbase 9.1 gene31444 X. tropicalis
Xenbase 9.2 gene19856 X. laevis.L
ENSEMBL 9.1 capn3 X. tropicalis
JGI 8.0 Xetrov14035333m.g X. tropicalis
JGI 7.1 Xetro.H01719 X. tropicalis
JGI 7.2 Xelaev16035640m.g X. laevis.L
JGI 6.0 XeXenL6RMv10031541m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000012304 X. tropicalis
JGI 4.1 e_gw1.145.81.1 X. tropicalis
JGI 4.1 gw1.145.11.1 X. tropicalis
JGI 4.1 gw1.145.51.1 X. tropicalis
JGI 4.1 gw1.145.81.1 X. tropicalis
JGI 4.1 e_gw1.145.11.1 X. tropicalis
JGI 4.1 e_gw1.145.51.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1450027 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1450011 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1450050 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1450080 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1450039 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1450040 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1450021 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_145000039 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_145000040 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_145000021 X. tropicalis

mRNAs based on gene models(47)

Source Version Model Species
NCBI 10.0 mRNA032148 X. tropicalis
NCBI 10.1 XBmRNA68357 X. laevis.L
NCBI 10.1 XBmRNA70045 X. laevis.S
ENSEMBL 10.0 ENSXETT00000087454 X. tropicalis
ENSEMBL 10.0 ENSXETT00000096253 X. tropicalis
ENSEMBL 10.0 ENSXETT00000026925 X. tropicalis
ENSEMBL 10.0 ENSXETT00000094368 X. tropicalis
ENSEMBL 10.0 ENSXETT00000082658 X. tropicalis
ENSEMBL 10.0 ENSXETT00000095469 X. tropicalis
ENSEMBL 10.0 ENSXETT00000071121 X. tropicalis
JGI 9.1 Xelaev18039947m X. laevis.L
JGI 9.1 Xelaev18041044m X. laevis.S
Xenbase 9.1 rna59778 X. tropicalis
Xenbase 9.2 rna57988 X. laevis.L
ENSEMBL 9.1 ENSXETT00000087454 X. tropicalis
ENSEMBL 9.1 ENSXETT00000096253 X. tropicalis
ENSEMBL 9.1 ENSXETT00000094368 X. tropicalis
ENSEMBL 9.1 ENSXETT00000082658 X. tropicalis
ENSEMBL 9.1 ENSXETT00000095469 X. tropicalis
ENSEMBL 9.1 ENSXETT00000068003 X. tropicalis
ENSEMBL 9.1 ENSXETT00000101309 X. tropicalis
ENSEMBL 9.1 ENSXETT00000077768 X. tropicalis
ENSEMBL 9.1 ENSXETT00000071121 X. tropicalis
ENSEMBL 9.1 ENSXETT00000026925 X. tropicalis
JGI 8.0 Xetrov14035333m X. tropicalis
JGI 7.1 Xetro.H01719.2 X. tropicalis
JGI 7.1 Xetro.H01719.3 X. tropicalis
JGI 7.1 Xetro.H01719.1 X. tropicalis
JGI 7.2 Xelaev16035640m X. laevis.L
JGI 6.0 XeXenL6RMv10031541m X. laevis.L
JGI 4.1 e_gw1.145.81.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000026925 X. tropicalis
JGI 4.1 e_gw1.145.11.1 X. tropicalis
JGI 4.1 e_gw1.145.51.1 X. tropicalis
JGI 4.1 gw1.145.11.1 X. tropicalis
JGI 4.1 gw1.145.51.1 X. tropicalis
JGI 4.1 gw1.145.81.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1450027 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1450011 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1450050 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1450080 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1450039 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1450040 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1450021 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_145000039 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_145000040 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_145000021 X. tropicalis

mRNAs from cDNA libraries (19)

Clone Accession Species Library Anatomy Stage
XM_002935335 X. tropicalis
XM_012969294 X. tropicalis
XM_004917239 X. tropicalis
XM_031890826 X. tropicalis
XM_031890825 X. tropicalis
XM_031890824 X. tropicalis
XM_031890823 X. tropicalis
IMAGE:8331755 BC123364 X. laevis.L
NM_001105269 X. laevis.L
XM_018228498 X. laevis.L
XM_018228497 X. laevis.L
XM_018228495 X. laevis.L
XM_018228493 X. laevis.L
XM_041574842 X. laevis.S
XM_041574841 X. laevis.S
XM_041574840 X. laevis.S
XM_041574839 X. laevis.S
XM_041574838 X. laevis.S
XM_041574837 X. laevis.S

ESTs (11)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8903605 EL794326 5' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:7854240 DT396260 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7850537 DT388805 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
TTbA043i20 CR434919 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:8903605 EL794327 3' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:7847584 DT531966 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7854240 DT396259 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7850537 DT388804 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
TTbA043i20 CR434920 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:8544996 EB466080 5' X. laevis.L NICHD_XGC_tail_m tail NF stage 56 to NF stage 62
PBX0075G04 AW638882 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage