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XB-GENEPAGE-5875738
Nucleotide sequences for capn3 - Xenopus tropicalis
RefSeq mRNAs(7) |
Models - Gene (23) |
Models - mRNA (40) |
mRNAs (7) |
ESTs (9) |
RefSeq mRNAs (7)
Accession | Version | Protein Name | Length | Protein | Species |
XM_002935335 | XM_002935335.5 | calpain-3 isoform X1 | 2987 bp | XP_002935381 | X. tropicalis |
XM_031890823 | XM_031890823.1 | XP_031746683.1 calpain-3 isoform X3 | 2965 bp | XP_031746683 | X. tropicalis |
XM_031890824 | XM_031890824.1 | XP_031746684.1 calpain-3 isoform X4 | 2861 bp | XP_031746684 | X. tropicalis |
XM_031890825 | XM_031890825.1 | XP_031746685.1 calpain-3 isoform X6 | 2833 bp | XP_031746685 | X. tropicalis |
XM_031890826 | XM_031890826.1 | XP_031746686.1 calpain-3 isoform X7 | 2707 bp | XP_031746686 | X. tropicalis |
XM_004917239 | XM_004917239.4 | calpain-3 isoform X2 | 2966 bp | XP_004917296 | X. tropicalis |
XM_012969294 | XM_012969294.3 | calpain-3 isoform X5 | 2855 bp | XP_012824748 | X. tropicalis |
Models - Gene (23)
Source | Version | Model | Species |
NCBI | 10.0 | XBXT10g006510 | X. tropicalis |
ENSEMBL | 10.0 | capn3 | X. tropicalis |
Xenbase | 9.1 | gene31444 | X. tropicalis |
ENSEMBL | 9.1 | capn3 | X. tropicalis |
JGI | 8.0 | Xetrov14035333m.g | X. tropicalis |
JGI | 7.1 | Xetro.H01719 | X. tropicalis |
ENSEMBL | 4.1 | ENSXETG00000012304 | X. tropicalis |
JGI | 4.1 | e_gw1.145.81.1 | X. tropicalis |
JGI | 4.1 | gw1.145.11.1 | X. tropicalis |
JGI | 4.1 | gw1.145.51.1 | X. tropicalis |
JGI | 4.1 | gw1.145.81.1 | X. tropicalis |
JGI | 4.1 | e_gw1.145.11.1 | X. tropicalis |
JGI | 4.1 | e_gw1.145.51.1 | X. tropicalis |
JGI | 4.1 | estExt_FilteredModels1.C_1450027 | X. tropicalis |
JGI | 4.1 | estExt_Genewise1.C_1450011 | X. tropicalis |
JGI | 4.1 | estExt_Genewise1.C_1450050 | X. tropicalis |
JGI | 4.1 | estExt_Genewise1.C_1450080 | X. tropicalis |
JGI | 4.1 | estExt_fgenesh1_pg.C_1450039 | X. tropicalis |
JGI | 4.1 | estExt_fgenesh1_pg.C_1450040 | X. tropicalis |
JGI | 4.1 | estExt_fgenesh1_pm.C_1450021 | X. tropicalis |
JGI | 4.1 | fgenesh1_pg.C_scaffold_145000039 | X. tropicalis |
JGI | 4.1 | fgenesh1_pg.C_scaffold_145000040 | X. tropicalis |
JGI | 4.1 | fgenesh1_pm.C_scaffold_145000021 | X. tropicalis |
mRNAs based on gene models(40)
Source | Version | Model | Species |
NCBI | 10.0 | mRNA032148 | X. tropicalis |
ENSEMBL | 10.0 | ENSXETT00000087454 | X. tropicalis |
ENSEMBL | 10.0 | ENSXETT00000096253 | X. tropicalis |
ENSEMBL | 10.0 | ENSXETT00000026925 | X. tropicalis |
ENSEMBL | 10.0 | ENSXETT00000094368 | X. tropicalis |
ENSEMBL | 10.0 | ENSXETT00000082658 | X. tropicalis |
ENSEMBL | 10.0 | ENSXETT00000095469 | X. tropicalis |
ENSEMBL | 10.0 | ENSXETT00000071121 | X. tropicalis |
Xenbase | 9.1 | rna59778 | X. tropicalis |
ENSEMBL | 9.1 | ENSXETT00000087454 | X. tropicalis |
ENSEMBL | 9.1 | ENSXETT00000096253 | X. tropicalis |
ENSEMBL | 9.1 | ENSXETT00000094368 | X. tropicalis |
ENSEMBL | 9.1 | ENSXETT00000082658 | X. tropicalis |
ENSEMBL | 9.1 | ENSXETT00000095469 | X. tropicalis |
ENSEMBL | 9.1 | ENSXETT00000068003 | X. tropicalis |
ENSEMBL | 9.1 | ENSXETT00000101309 | X. tropicalis |
ENSEMBL | 9.1 | ENSXETT00000077768 | X. tropicalis |
ENSEMBL | 9.1 | ENSXETT00000071121 | X. tropicalis |
ENSEMBL | 9.1 | ENSXETT00000026925 | X. tropicalis |
JGI | 8.0 | Xetrov14035333m | X. tropicalis |
JGI | 7.1 | Xetro.H01719.2 | X. tropicalis |
JGI | 7.1 | Xetro.H01719.3 | X. tropicalis |
JGI | 7.1 | Xetro.H01719.1 | X. tropicalis |
JGI | 4.1 | e_gw1.145.81.1 | X. tropicalis |
ENSEMBL | 4.1 | ENSXETT00000026925 | X. tropicalis |
JGI | 4.1 | e_gw1.145.11.1 | X. tropicalis |
JGI | 4.1 | e_gw1.145.51.1 | X. tropicalis |
JGI | 4.1 | gw1.145.11.1 | X. tropicalis |
JGI | 4.1 | gw1.145.51.1 | X. tropicalis |
JGI | 4.1 | gw1.145.81.1 | X. tropicalis |
JGI | 4.1 | estExt_FilteredModels1.C_1450027 | X. tropicalis |
JGI | 4.1 | estExt_Genewise1.C_1450011 | X. tropicalis |
JGI | 4.1 | estExt_Genewise1.C_1450050 | X. tropicalis |
JGI | 4.1 | estExt_Genewise1.C_1450080 | X. tropicalis |
JGI | 4.1 | estExt_fgenesh1_pg.C_1450039 | X. tropicalis |
JGI | 4.1 | estExt_fgenesh1_pg.C_1450040 | X. tropicalis |
JGI | 4.1 | estExt_fgenesh1_pm.C_1450021 | X. tropicalis |
JGI | 4.1 | fgenesh1_pg.C_scaffold_145000039 | X. tropicalis |
JGI | 4.1 | fgenesh1_pg.C_scaffold_145000040 | X. tropicalis |
JGI | 4.1 | fgenesh1_pm.C_scaffold_145000021 | X. tropicalis |
mRNAs from cDNA libraries (7)
Clone | Accession | Species | Library | Anatomy | Stage |
XM_002935335 | X. tropicalis | ||||
XM_012969294 | X. tropicalis | ||||
XM_004917239 | X. tropicalis | ||||
XM_031890826 | X. tropicalis | ||||
XM_031890825 | X. tropicalis | ||||
XM_031890824 | X. tropicalis | ||||
XM_031890823 | X. tropicalis |
ESTs (9)
Clone | Accession | 5'/3' | Species | Library | Anatomy | Stage |
IMAGE:8903605 | EL794326 | 5' | X. tropicalis | NICHD_XGC_tropTail_m | tail | NF stage 55 to NF stage 66 |
IMAGE:7854240 | DT396260 | 5' | X. tropicalis | NIH_XGC_tropSkeMus1 | skeletal muscle | frog |
IMAGE:7850537 | DT388805 | 5' | X. tropicalis | NIH_XGC_tropSkeMus1 | skeletal muscle | frog |
TTbA043i20 | CR434919 | 5' | X. tropicalis | XGC-tailbud | whole organism | NF stage 28 to NF stage 29 and 30 |
IMAGE:8903605 | EL794327 | 3' | X. tropicalis | NICHD_XGC_tropTail_m | tail | NF stage 55 to NF stage 66 |
IMAGE:7847584 | DT531966 | 3' | X. tropicalis | NIH_XGC_tropSkeMus1 | skeletal muscle | frog |
IMAGE:7854240 | DT396259 | 3' | X. tropicalis | NIH_XGC_tropSkeMus1 | skeletal muscle | frog |
IMAGE:7850537 | DT388804 | 3' | X. tropicalis | NIH_XGC_tropSkeMus1 | skeletal muscle | frog |
TTbA043i20 | CR434920 | 3' | X. tropicalis | XGC-tailbud | whole organism | NF stage 28 to NF stage 29 and 30 |