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Summary Expression Phenotypes Gene Literature (0) GO Terms (0) Nucleotides (134) Proteins (37) Interactants (1) Wiki
XB-GENEPAGE-5860806

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for prpf39.2 - Xenopus tropicalis

RefSeq mRNAs(2)
Models - Gene (21)
Models - mRNA (24)
mRNAs (5)
ESTs (44)

RefSeq mRNAs (2)

Accession Version name Length Protein Species
XM_002937502 XM_002937502.5 pre-mRNA-processing factor 39 isoform X1 2624 bp XP_002937548 X. tropicalis
XM_012962378 XM_012962378.3 pre-mRNA-processing factor 39 isoform X2 2597 bp XP_012817832 X. tropicalis

Models - Gene (21)

Source Version Model Species
NCBI 10.0 XBXT10g015990 X. tropicalis
ENSEMBL 10.0 prpf39.2 X. tropicalis
Xenbase 9.1 gene30018 X. tropicalis
ENSEMBL 9.1 prpf39.2 X. tropicalis
JGI 7.1 Xetro.D01032 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2960002 X. tropicalis
JGI 4.1 e_gw1.296.122.1 X. tropicalis
JGI 4.1 e_gw1.296.170.1 X. tropicalis
JGI 4.1 e_gw1.296.25.1 X. tropicalis
JGI 4.1 e_gw1.296.39.1 X. tropicalis
JGI 4.1 gw1.296.122.1 X. tropicalis
JGI 4.1 gw1.296.170.1 X. tropicalis
JGI 4.1 gw1.296.25.1 X. tropicalis
JGI 4.1 gw1.296.39.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2960005 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2960039 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2960122 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2960170 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2960007 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_296000007 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_296000002 X. tropicalis

mRNAs based on gene models(24)

Source Version Model Species
NCBI 10.0 mRNA079102 X. tropicalis
ENSEMBL 10.0 ENSXETT00000060156 X. tropicalis
Xenbase 9.1 rna57571 X. tropicalis
ENSEMBL 9.1 ENSXETT00000060156 X. tropicalis
ENSEMBL 9.1 ENSXETT00000100568 X. tropicalis
JGI 7.1 Xetro.D01032.3 X. tropicalis
JGI 7.1 Xetro.D01032.2 X. tropicalis
JGI 7.1 Xetro.D01032.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2960002 X. tropicalis
JGI 4.1 e_gw1.296.122.1 X. tropicalis
JGI 4.1 e_gw1.296.170.1 X. tropicalis
JGI 4.1 e_gw1.296.25.1 X. tropicalis
JGI 4.1 e_gw1.296.39.1 X. tropicalis
JGI 4.1 gw1.296.122.1 X. tropicalis
JGI 4.1 gw1.296.170.1 X. tropicalis
JGI 4.1 gw1.296.25.1 X. tropicalis
JGI 4.1 gw1.296.39.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2960005 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2960039 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2960122 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2960170 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2960007 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_296000007 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_296000002 X. tropicalis

mRNAs from cDNA libraries (5)

Clone Accession Species Library Anatomy Stage
IMAGE:7677766 BC127269 X. tropicalis
IMAGE:6991050 BC088586 X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:8924593 BC161797 X. tropicalis NICHD_XGC_tropThy1 thymus frog
XM_002937502 X. tropicalis
XM_012962378 X. tropicalis

ESTs (44)

Clone Accession 5'/3' Species Library Anatomy Stage
TNeu073a07 BX683634 - X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:8904820 EL796559 5' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:8924593 EL669639 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8954054 EL663986 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
st41o04 DC177141 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st39o04 DC176670 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st15d08 DC167145 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:8948580 EG651401 5' X. tropicalis NICHD_XGC_tropInt_60 intestine frog
XZT12136 CX320368 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7614785 CX390830 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7602837 CX394057 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7533624 CX427853 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7556873 CX504712 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7596882 DR891522 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7798921 DN059454 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7716353 CX976582 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7712425 CX969662 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7525296 CX442714 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas095m08 AL968426 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas079m08 AL775081 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu137b12 AL786082 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu073a07 AL779473 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7027994 CF786177 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
IMAGE:6991050 CF272131 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:8904820 EL796560 3' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:8924593 EL669638 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
rst41o04 DC146846 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst39o04 DC146373 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst15d08 DC137080 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
XZT12136 CX320367 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7624487 DR899474 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7596882 DR891521 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7798921 DN059453 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7716353 CX976581 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7712425 CX969661 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7556873 CX504711 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7533624 CX427852 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7602837 CX394056 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7614785 CX390829 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7587644 CX313850 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TGas079m08 BX751963 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas095m08 BX751479 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:6991050 CF216814 3' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:4463165 BG886317 3' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12