Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (0) GO Terms (4) Nucleotides (91) Proteins (45) Interactants (1) Wiki
XB-GENEPAGE-5839531

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for tatdn3 - All

RefSeq mRNAs(2)
Models - Gene (27)
Models - mRNA (29)
mRNAs (6)
ESTs (14)

RefSeq mRNAs (2)

Accession Version name Length Protein Species
NM_001096925 NM_001096925.1 putative deoxyribonuclease tatdn3-A 1156 bp NP_001090394 X. laevis.L
XM_041562347 XM_041562347.1 XP_041418281.1 putative deoxyribonuclease tatdn3-A isoform X1 1193 bp XP_041418281 X. laevis.L

Models - Gene (27)

Source Version Model Species
NCBI 10.0 XBXT10g002426 X. tropicalis
NCBI 10.1 XBXL10_1g22614 X. laevis.L
ENSEMBL 10.0 tatdn3 X. tropicalis
JGI 9.1 Xelaev18026211m.g X. laevis.L
Xenbase 9.1 gene2723 X. tropicalis
Xenbase 9.2 gene2143 X. laevis.L
JGI 8.0 Xetrov14024422m.g X. tropicalis
JGI 7.1 Xetro.E01544 X. tropicalis
JGI 7.2 Xelaev16000768m.g X. laevis.L
JGI 6.0 XeXenL6RMv10034551m.g X. laevis.L
JGI 4.1 estExt_Genewise1.C_1080150 X. tropicalis
JGI 4.1 e_gw1.108.152.1 X. tropicalis
JGI 4.1 e_gw1.108.187.1 X. tropicalis
JGI 4.1 e_gw1.108.223.1 X. tropicalis
JGI 4.1 e_gw1.108.53.1 X. tropicalis
JGI 4.1 gw1.108.152.1 X. tropicalis
JGI 4.1 gw1.108.223.1 X. tropicalis
JGI 4.1 gw1.108.53.1 X. tropicalis
JGI 4.1 gw1.108.187.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1080030 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1080052 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1080184 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1080220 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1080015 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1080051 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_108000015 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_108000051 X. tropicalis

mRNAs based on gene models(29)

Source Version Model Species
NCBI 10.0 mRNA012299 X. tropicalis
NCBI 10.1 XBmRNA42148 X. laevis.L
ENSEMBL 10.0 ENSXETT00000121434 X. tropicalis
ENSEMBL 10.0 ENSXETT00000031422 X. tropicalis
JGI 9.1 Xelaev18026211m X. laevis.L
Xenbase 9.2 rna6221 X. laevis.L
Xenbase 9.1 rna9016 X. tropicalis
JGI 8.0 Xetrov14024422m X. tropicalis
JGI 7.1 Xetro.E01544.1 X. tropicalis
JGI 7.1 Xetro.E01544.2 X. tropicalis
JGI 7.2 Xelaev16000768m X. laevis.L
JGI 6.0 XeXenL6RMv10034551m X. laevis.L
JGI 4.1 estExt_Genewise1.C_1080150 X. tropicalis
JGI 4.1 e_gw1.108.152.1 X. tropicalis
JGI 4.1 e_gw1.108.187.1 X. tropicalis
JGI 4.1 e_gw1.108.223.1 X. tropicalis
JGI 4.1 e_gw1.108.53.1 X. tropicalis
JGI 4.1 gw1.108.152.1 X. tropicalis
JGI 4.1 gw1.108.223.1 X. tropicalis
JGI 4.1 gw1.108.53.1 X. tropicalis
JGI 4.1 gw1.108.187.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1080030 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1080052 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1080184 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1080220 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1080015 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1080051 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_108000015 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_108000051 X. tropicalis

mRNAs from cDNA libraries (6)

Clone Accession Species Library Anatomy Stage
IMAGE:7006139 BC088893 X. tropicalis
XM_012963945 X. tropicalis
XM_012963946 X. tropicalis
IMAGE:8327866 BC123334 X. laevis.L
NM_001096925 X. laevis.L
XM_041562347 X. laevis.L

ESTs (14)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8921748 EL836132 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8902777 EL801212 5' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:8952029 EL660129 5' X. tropicalis NICHD_XGC_tropInt_60 intestine frog
IMAGE:8957854 EL659471 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
CAAO12612 CX963677 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7610305 CX376659 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7702871 CX938287 5' X. tropicalis NIH_XGC_tropTe5 testis frog
THdA052p06 CR585664 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:8921748 EL836133 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8902777 EL801213 3' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
CAAO12612 CX963676 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7702871 CX938286 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7610305 CX376658 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TNeu103l01 BX699227 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21