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Summary Expression Phenotypes Gene Literature (11) GO Terms (20) Nucleotides (592) Proteins (72) Interactants (107) Wiki
XB-GENEPAGE-5825633

Show:     All X. tropicalis X. laevis

Nucleotide sequences for srrt - All

RefSeq mRNAs(6)
Models - Gene (36)
Models - mRNA (49)
mRNAs (13)
ESTs (414)

RefSeq mRNAs (6)

Accession Version Protein Name Length Protein Species
NM_001375276 NM_001375276.2 serrate RNA effector molecule homolog 2849 bp NP_001362205 X. tropicalis
XM_031897953 XM_031897953.1 XP_031753813.1 serrate RNA effector molecule homolog isoform X1 2955 bp XP_031753813 X. tropicalis
XM_031897954 XM_031897954.1 XP_031753814.1 serrate RNA effector molecule homolog isoform X2 2877 bp XP_031753814 X. tropicalis
NM_001089063 NM_001089063.1 serrate RNA effector molecule homolog B 2754 bp NP_001082532 X. laevis.L
NM_001122696 NM_001122696.1 serrate RNA effector molecule homolog A 2795 bp NP_001116168 X. laevis.S
XM_018239483 XM_018239483.2 serrate RNA effector molecule homolog A isoform X1 2895 bp XP_018094972 X. laevis.S

Models - Gene (36)

Source Version Model Species
NCBI 10.1 XBXL10_1g17515 X. laevis.S
NCBI 10.1 XBXL10_1g14797 X. laevis.L
NCBI 10.0 XBXT10g008416 X. tropicalis
ENSEMBL 10.0 srrt X. tropicalis
Xenbase 9.2 gene40564 X. laevis.L
Xenbase 9.2 gene46662 X. laevis.S
JGI 9.1 Xelaev18019533m.g X. laevis.L
JGI 9.1 Xelaev18001027m.g X. laevis.S
Xenbase 9.1 gene7490 X. tropicalis
ENSEMBL 9.1 srrt X. tropicalis
JGI 7.2 Xelaev16003671m.g X. laevis.S
JGI 7.2 Xelaev16017457m.g X. laevis.L
JGI 7.1 Xetro.K03409 X. tropicalis
JGI 6.0 XeXenL6RMv10044509m.g X. laevis.S
JGI 6.0 XeXenL6RMv10036041m.g X. laevis.L
JGI 6.0 XeXenL6RMv10036041m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000015451 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_1609000001 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_1609000002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_1609000002 X. tropicalis
JGI 4.1 gw1.1609.14.1 X. tropicalis
JGI 4.1 e_gw1.1609.10.1 X. tropicalis
JGI 4.1 e_gw1.1609.14.1 X. tropicalis
JGI 4.1 e_gw1.1609.9.1 X. tropicalis
JGI 4.1 gw1.1609.10.1 X. tropicalis
JGI 4.1 gw1.1609.9.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_16090001 X. tropicalis
JGI 4.1 estExt_Genewise1.C_16090009 X. tropicalis
JGI 4.1 estExt_Genewise1.C_16090010 X. tropicalis
JGI 4.1 estExt_Genewise1.C_16090014 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_16090002 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_16090003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_16090001 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_16090002 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_1609000001 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_1609000003 X. tropicalis

mRNAs based on gene models(49)

Source Version Model Species
NCBI 10.1 XBmRNA27591 X. laevis.L
NCBI 10.1 XBmRNA32277 X. laevis.S
ENSEMBL 10.0 ENSXETT00000094925 X. tropicalis
ENSEMBL 10.0 ENSXETT00000033723 X. tropicalis
NCBI 10.0 mRNA041760 X. tropicalis
ENSEMBL 10.0 ENSXETT00000097602 X. tropicalis
Xenbase 9.2 rna82628 X. laevis.L
Xenbase 9.2 rna91525 X. laevis.S
ENSEMBL 9.1 ENSXETT00000097602 X. tropicalis
ENSEMBL 9.1 ENSXETT00000098121 X. tropicalis
JGI 9.1 Xelaev18019533m X. laevis.L
Xenbase 9.1 rna24130 X. tropicalis
JGI 9.1 Xelaev18001027m X. laevis.S
ENSEMBL 9.1 ENSXETT00000033723 X. tropicalis
ENSEMBL 9.1 ENSXETT00000033727 X. tropicalis
ENSEMBL 9.1 ENSXETT00000071811 X. tropicalis
ENSEMBL 9.1 ENSXETT00000074905 X. tropicalis
ENSEMBL 9.1 ENSXETT00000094925 X. tropicalis
ENSEMBL 9.1 ENSXETT00000097476 X. tropicalis
JGI 7.2 Xelaev16017457m X. laevis.L
JGI 7.2 Xelaev16003671m X. laevis.S
JGI 7.1 Xetro.K03409.4 X. tropicalis
JGI 7.1 Xetro.K03409.2 X. tropicalis
JGI 7.1 Xetro.K03409.1 X. tropicalis
JGI 7.1 Xetro.K03409.3 X. tropicalis
JGI 7.1 Xetro.K03409.5 X. tropicalis
JGI 6.0 XeXenL6RMv10044509m X. laevis.S
JGI 6.0 XeXenL6RMv10036041m X. laevis.L
JGI 6.0 XeXenL6RMv10036041m X. laevis.S
JGI 4.1 gw1.1609.14.1 X. tropicalis
JGI 4.1 gw1.1609.9.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_1609000002 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_1609000001 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_1609000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_1609000002 X. tropicalis
JGI 4.1 estExt_Genewise1.C_16090014 X. tropicalis
JGI 4.1 estExt_Genewise1.C_16090010 X. tropicalis
JGI 4.1 estExt_Genewise1.C_16090009 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_16090001 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_16090002 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_16090001 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_16090003 X. tropicalis
JGI 4.1 e_gw1.1609.10.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_16090002 X. tropicalis
ENSEMBL 4.1 ENSXETT00000033727 X. tropicalis
JGI 4.1 e_gw1.1609.9.1 X. tropicalis
JGI 4.1 e_gw1.1609.14.1 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_1609000001 X. tropicalis
JGI 4.1 gw1.1609.10.1 X. tropicalis

mRNAs from cDNA libraries (13)

Clone Accession Species Library Anatomy Stage
TGas127g17 CR761794 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu085k13 CT485747 X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
NM_001017052 X. tropicalis
NM_001375276 X. tropicalis
XM_031897953 X. tropicalis
XM_031897954 X. tropicalis
IMAGE:5542042 BC041542 X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:4970768 BC072306 X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
NM_001089063 X. laevis.L
IMAGE:4032265 BC128976 X. laevis.S
IMAGE:5084800 BC160771 X. laevis.S
NM_001122696 X. laevis.S
XM_018239483 X. laevis.S

ESTs (414)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
TNeu044f14 AL658434 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu046m18 AL659016 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu064a05 AL778326 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu064e05 AL778349 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu085k13 AL787117 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu094d21 AL791526 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu135e13 AL795319 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu128l08 AL796387 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu112e23 AL798684 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu135n24 AL798970 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu139m11 AL799264 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu088l11 AL800088 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu087p01 AL805083 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:6981510 CF222282 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:8871202 EL713106 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:7512887 CX742116 5' X. tropicalis NIH_XGC_tropGas6 whole organism NF stage 10 to NF stage 13
IMAGE:8909209 EL803788 5' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
xthr12B03 CN097109 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:8911983 EL808323 5' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:9016774 EL863990 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7673277 CX882233 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:8960900 EL653682 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
IMAGE:5383875 BQ396404 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:6995855 CF238903 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:6995280 CF239229 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:6994786 CF239877 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:7653800 CX823137 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7608525 CX409537 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7597698 CX386771 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7610822 CX377780 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7602178 CX365592 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7601971 CX365500 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7594370 CX331639 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
XZT13594 CX322034 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTpA041c07 BX737392 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA064i11 BX729591 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA026h22 BX719727 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
THdA050g04 CR586842 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA046f17 CR585025 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA007d03 CR560095 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA005c11 CR416853 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7559929 CX515277 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas001l16 AL594879 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas015g22 AL631809 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas014m15 AL632431 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas020n09 AL632718 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas021l08 AL633146 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
L1G3f6 AL643778 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas037f20 AL647816 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas032h16 AL648873 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas049e03 AL649380 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas042j01 AL653429 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas040c07 AL653745 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas063b13 AL675221 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas064b13 AL678308 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas127g17 AL959340 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas112b04 AL962537 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:8965078 EL657322 5' X. tropicalis NICHD_XGC_tropInt_66 intestine unspecified stage
TGas134b21 AL964582 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas134l17 AL964619 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas119k18 AL970420 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas133k04 AL972915 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:8966161 EL660934 5' X. tropicalis NICHD_XGC_tropInt_66 intestine unspecified stage
IMAGE:8855167 EL817407 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8928862 EL677918 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8925796 EL672551 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8925542 EL671777 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:7565063 CX475688 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7564436 CX475343 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7562602 CX466995 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7561618 CX465476 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7575073 CX442425 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7573603 CX437423 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7532051 CX432643 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7575434 CX430161 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7578181 CX416096 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8952321 EG652270 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
IMAGE:7719297 CX981925 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7716875 CX977908 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7674745 CX885099 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7711861 CX968699 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
CAAO12334 CX963170 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7702969 CX938984 5' X. tropicalis NIH_XGC_tropTe5 testis frog
CAAO4780 CX936176 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:4440855 BG511862 5' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
IMAGE:9010712 EL855547 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:4461483 BG884729 5' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
IMAGE:8869840 EL711175 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8887046 EL844869 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:6981510 CF222281 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
st10d14 DC165660 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st12h15 DC166328 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st14h15 DC166933 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st15c22 DC167138 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st15h15 DC167226 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st18c09 DC168029 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st18g11 DC168096 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st1f09 DC168631 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st1i02 DC168675 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5