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Summary Expression Phenotypes Gene Literature (0) GO Terms (6) Nucleotides (81) Proteins (38) Interactants (12) Wiki
XB-GENEPAGE-5820244

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for shq1 - All

RefSeq mRNAs(3)
Models - Gene (17)
Models - mRNA (25)
mRNAs (5)
ESTs (20)

RefSeq mRNAs (3)

Accession Version Protein Name Length Protein Species
NM_001079148 NM_001079148.1 protein SHQ1 homolog 2409 bp NP_001072616 X. tropicalis
XM_012961357 XM_012961357.3 protein SHQ1 homolog isoform X1 2527 bp XP_012816811 X. tropicalis
NM_001130947 NM_001130947.1 SHQ1, H/ACA ribonucleoprotein assembly factor L homeolog 2473 bp NP_001124419 X. laevis.L

Models - Gene (17)

Source Version Model Species
NCBI 10.0 XBXT10g007693 X. tropicalis
NCBI 10.1 XBXL10_1g20067 X. laevis.L
ENSEMBL 10.0 shq1 X. tropicalis
JGI 9.1 Xelaev18024088m.g X. laevis.L
Xenbase 9.1 gene3210 X. tropicalis
Xenbase 9.2 gene10085 X. laevis.L
ENSEMBL 9.1 tshz3 X. tropicalis
JGI 7.1 Xetro.D02428 X. tropicalis
JGI 7.2 Xelaev16010323m.g X. laevis.L
JGI 6.0 XeXenL6RMv10012718m.g X. laevis.L
JGI 4.1 fgenesh1_pg.C_scaffold_404000012 X. tropicalis
JGI 4.1 e_gw1.404.1.1 X. tropicalis
JGI 4.1 e_gw1.404.55.1 X. tropicalis
JGI 4.1 e_gw1.404.77.1 X. tropicalis
JGI 4.1 gw1.404.1.1 X. tropicalis
JGI 4.1 gw1.404.55.1 X. tropicalis
JGI 4.1 gw1.404.77.1 X. tropicalis

mRNAs based on gene models(25)

Source Version Model Species
NCBI 10.0 mRNA038116 X. tropicalis
NCBI 10.1 XBmRNA37158 X. laevis.L
ENSEMBL 10.0 ENSXETT00000098147 X. tropicalis
ENSEMBL 10.0 ENSXETT00000001920 X. tropicalis
ENSEMBL 10.0 ENSXETT00000087191 X. tropicalis
JGI 9.1 Xelaev18024088m X. laevis.L
Xenbase 9.1 rna10530 X. tropicalis
Xenbase 9.2 rna29318 X. laevis.L
ENSEMBL 9.1 ENSXETT00000093585 X. tropicalis
ENSEMBL 9.1 ENSXETT00000070480 X. tropicalis
ENSEMBL 9.1 ENSXETT00000001920 X. tropicalis
ENSEMBL 9.1 ENSXETT00000098147 X. tropicalis
ENSEMBL 9.1 ENSXETT00000087191 X. tropicalis
JGI 7.1 Xetro.D02428.3 X. tropicalis
JGI 7.1 Xetro.D02428.2 X. tropicalis
JGI 7.1 Xetro.D02428.1 X. tropicalis
JGI 7.2 Xelaev16010323m X. laevis.L
JGI 6.0 XeXenL6RMv10012718m X. laevis.L
JGI 4.1 fgenesh1_pg.C_scaffold_404000012 X. tropicalis
JGI 4.1 e_gw1.404.1.1 X. tropicalis
JGI 4.1 e_gw1.404.55.1 X. tropicalis
JGI 4.1 e_gw1.404.77.1 X. tropicalis
JGI 4.1 gw1.404.1.1 X. tropicalis
JGI 4.1 gw1.404.55.1 X. tropicalis
JGI 4.1 gw1.404.77.1 X. tropicalis

mRNAs from cDNA libraries (5)

Clone Accession Species Library Anatomy Stage
NM_001079148 X. tropicalis
IMAGE:7661206 BC123006 X. tropicalis NIH_XGC_tropBrn3 brain frog
XM_012961357 X. tropicalis
IMAGE:8327868 BC167497 X. laevis.L
NM_001130947 X. laevis.L

ESTs (20)

Clone Accession 5'/3' Species Library Anatomy Stage
TGas065a19 AL679146 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7574725 CX441685 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7610996 CX377950 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7640007 CX315009 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
st37h05 DC175983 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7528854 CX425744 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7661206 CX842831 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7557547 CX506023 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7571344 CX512759 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas065a19 BX746117 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7640007 CX315008 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7610996 CX377949 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7574725 CX441684 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7557547 CX506022 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7661206 CX842830 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
XL091g07 BJ070694 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL488e20ex BP699638 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
xl230j16 DC102848 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL488e20ex BP732526 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
rxl230j16 DC068751 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15