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Summary Expression Phenotypes Gene Literature (18) GO Terms (7) Nucleotides (108) Proteins (52) Interactants (268) Wiki
XB-GENEPAGE-5807409

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for homer1 - All

RefSeq mRNAs(6)
Models - Gene (24)
Models - mRNA (30)
mRNAs (15)
ESTs (12)

RefSeq mRNAs (6)

Accession Version name Length Protein Species
NM_001113132 homer protein homolog 1 1657 bp NP_001106603 X. tropicalis
NM_001095583 homer scaffold protein 1 L homeolog 1427 bp NP_001089052 X. laevis.L
XM_041582497 XP_041438431.1 homer scaffold protein 1 L homeolog isoform X1 1443 bp XP_041438431 X. laevis.L
XM_041582508 XP_041438442.1 homer scaffold protein 1 L homeolog isoform X3 1358 bp XP_041438442 X. laevis.L
XM_041582515 XP_041438449.1 homer scaffold protein 1 L homeolog isoform X4 1433 bp XP_041438449 X. laevis.L
XM_041580526 XP_041436460.1 homer protein homolog 1 isoform X2 1700 bp XP_041436460 X. laevis.S

Models - Gene (24)

Source Version Model Species
NCBI 10.0 XBXT10g001271 X. tropicalis
NCBI 10.1 XBXL10_1g3123 X. laevis.L
NCBI 10.1 XBXL10_1g5632 X. laevis.S
ENSEMBL 10.0 homer1 X. tropicalis
JGI 9.1 Xelaev18008198m.g X. laevis.L
JGI 9.1 Xelaev18010920m.g X. laevis.S
Xenbase 9.1 gene22295 X. tropicalis
Xenbase 9.2 gene41828 X. laevis.L
Xenbase 9.2 gene19110 X. laevis.S
ENSEMBL 9.1 homer1 X. tropicalis
JGI 7.1 Xetro.A00258 X. tropicalis
JGI 7.2 Xelaev16028683m.g X. laevis.L
JGI 6.0 XeXenL6RMv10021650m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000000519 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_579000004 X. tropicalis
JGI 4.1 e_gw1.579.13.1 X. tropicalis
JGI 4.1 e_gw1.579.30.1 X. tropicalis
JGI 4.1 e_gw1.579.62.1 X. tropicalis
JGI 4.1 gw1.579.13.1 X. tropicalis
JGI 4.1 gw1.579.30.1 X. tropicalis
JGI 4.1 gw1.579.62.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_579000012 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_579000013 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_579000004 X. tropicalis

mRNAs based on gene models(30)

Source Version Model Species
NCBI 10.0 mRNA006425 X. tropicalis
NCBI 10.1 XBmRNA5649 X. laevis.L
NCBI 10.1 XBmRNA10561 X. laevis.S
ENSEMBL 10.0 ENSXETT00000081699 X. tropicalis
ENSEMBL 10.0 ENSXETT00000001118 X. tropicalis
JGI 9.1 Xelaev18008198m X. laevis.L
JGI 9.1 Xelaev18010920m X. laevis.S
Xenbase 9.1 rna45226 X. tropicalis
Xenbase 9.2 rna84416 X. laevis.L
Xenbase 9.2 rna55799 X. laevis.S
ENSEMBL 9.1 ENSXETT00000001118 X. tropicalis
ENSEMBL 9.1 ENSXETT00000104081 X. tropicalis
ENSEMBL 9.1 ENSXETT00000067281 X. tropicalis
ENSEMBL 9.1 ENSXETT00000081699 X. tropicalis
JGI 7.1 Xetro.A00258.1 X. tropicalis
JGI 7.1 Xetro.A00258.2 X. tropicalis
JGI 7.1 Xetro.A00258.3 X. tropicalis
JGI 7.2 Xelaev16028683m X. laevis.L
JGI 6.0 XeXenL6RMv10021650m X. laevis.L
JGI 4.1 fgenesh1_kg.C_scaffold_579000004 X. tropicalis
ENSEMBL 4.1 ENSXETT00000001118 X. tropicalis
JGI 4.1 e_gw1.579.13.1 X. tropicalis
JGI 4.1 e_gw1.579.30.1 X. tropicalis
JGI 4.1 e_gw1.579.62.1 X. tropicalis
JGI 4.1 gw1.579.13.1 X. tropicalis
JGI 4.1 gw1.579.30.1 X. tropicalis
JGI 4.1 gw1.579.62.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_579000012 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_579000013 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_579000004 X. tropicalis

mRNAs from cDNA libraries (15)

Clone Accession Species Library Anatomy Stage
IMAGE:7602535 BC135289 X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7866741 BC155436 X. tropicalis
NM_001113132 X. tropicalis
XM_012971402 X. tropicalis
XM_012971377 X. tropicalis
AY859476 X. laevis.L
NM_001095583 X. laevis.L
IMAGE:9093690 BC170308 X. laevis.L
XM_018249310 X. laevis.L
XM_018244465 X. laevis.S
XM_018244464 X. laevis.S
XM_041580526 X. laevis.S
XM_041582515 X. laevis.L
XM_041582508 X. laevis.L
XM_041582497 X. laevis.L

ESTs (12)

Clone Accession 5'/3' Species Library Anatomy Stage
CAAO10747 CX960227 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7602535 CX365995 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7845738 DT528280 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7602456 DR893162 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7522241 CX471099 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
CAAO10747 CX960226 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7602535 CX365994 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7845738 DT528279 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7522241 CX471098 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7602456 CX393787 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
XL057h10 BJ075422 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:3199372 AW766998 5' X. laevis.L Harland stage 19-23 whole organism NF stage 19 to NF stage 23