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Summary Expression Phenotypes Gene Literature (18) GO Terms (7) Nucleotides (108) Proteins (52) Interactants (268) Wiki
XB-GENEPAGE-5807409

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for homer1 - Xenopus tropicalis

RefSeq mRNAs(3)
Models - Gene (16)
Models - mRNA (22)
mRNAs (5)
ESTs (10)

RefSeq mRNAs (3)

Accession Version Protein Name Length Protein Species
NM_001113132 NM_001113132.1 homer protein homolog 1 1657 bp NP_001106603 X. tropicalis
XM_012971377 XM_012971377.3 homer protein homolog 1 isoform X1 6613 bp XP_012826831 X. tropicalis
XM_012971402 XM_012971402.3 homer protein homolog 1 isoform X2 5334 bp XP_012826856 X. tropicalis

Models - Gene (16)

Source Version Model Species
NCBI 10.0 XBXT10g001271 X. tropicalis
ENSEMBL 10.0 homer1 X. tropicalis
Xenbase 9.1 gene22295 X. tropicalis
ENSEMBL 9.1 homer1 X. tropicalis
JGI 7.1 Xetro.A00258 X. tropicalis
ENSEMBL 4.1 ENSXETG00000000519 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_579000004 X. tropicalis
JGI 4.1 e_gw1.579.13.1 X. tropicalis
JGI 4.1 e_gw1.579.30.1 X. tropicalis
JGI 4.1 e_gw1.579.62.1 X. tropicalis
JGI 4.1 gw1.579.13.1 X. tropicalis
JGI 4.1 gw1.579.30.1 X. tropicalis
JGI 4.1 gw1.579.62.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_579000012 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_579000013 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_579000004 X. tropicalis

mRNAs based on gene models(22)

Source Version Model Species
NCBI 10.0 mRNA006425 X. tropicalis
ENSEMBL 10.0 ENSXETT00000081699 X. tropicalis
ENSEMBL 10.0 ENSXETT00000001118 X. tropicalis
Xenbase 9.1 rna45226 X. tropicalis
ENSEMBL 9.1 ENSXETT00000001118 X. tropicalis
ENSEMBL 9.1 ENSXETT00000104081 X. tropicalis
ENSEMBL 9.1 ENSXETT00000067281 X. tropicalis
ENSEMBL 9.1 ENSXETT00000081699 X. tropicalis
JGI 7.1 Xetro.A00258.1 X. tropicalis
JGI 7.1 Xetro.A00258.2 X. tropicalis
JGI 7.1 Xetro.A00258.3 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_579000004 X. tropicalis
ENSEMBL 4.1 ENSXETT00000001118 X. tropicalis
JGI 4.1 e_gw1.579.13.1 X. tropicalis
JGI 4.1 e_gw1.579.30.1 X. tropicalis
JGI 4.1 e_gw1.579.62.1 X. tropicalis
JGI 4.1 gw1.579.13.1 X. tropicalis
JGI 4.1 gw1.579.30.1 X. tropicalis
JGI 4.1 gw1.579.62.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_579000012 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_579000013 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_579000004 X. tropicalis

mRNAs from cDNA libraries (5)

Clone Accession Species Library Anatomy Stage
IMAGE:7602535 BC135289 X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7866741 BC155436 X. tropicalis
NM_001113132 X. tropicalis
XM_012971402 X. tropicalis
XM_012971377 X. tropicalis

ESTs (10)

Clone Accession 5'/3' Species Library Anatomy Stage
CAAO10747 CX960227 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7602535 CX365995 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7845738 DT528280 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7602456 DR893162 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7522241 CX471099 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
CAAO10747 CX960226 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7602535 CX365994 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7845738 DT528279 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7522241 CX471098 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7602456 CX393787 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41