Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (0) GO Terms (34) Nucleotides (115) Proteins (48) Interactants (0) Wiki
XB-GENEPAGE-5807236

Show:     All X. tropicalis X. laevis

Nucleotide sequences for rdh16.2 - All

RefSeq mRNAs(6)
Models - Gene (27)
Models - mRNA (29)
mRNAs (8)
ESTs (13)

RefSeq mRNAs (6)

Accession Version Protein Name Length Protein Species
NM_001130203 NM_001130203.1 uncharacterized protein LOC100170425 1264 bp NP_001123675 X. tropicalis
XM_012956533 XM_012956533.1 uncharacterized protein LOC100170425 isoform X1 1250 bp XP_012811987 X. tropicalis
XM_031895719 XM_031895719.1 XP_031751579.1 uncharacterized protein LOC100170425 isoform X2 1308 bp XP_031751579 X. tropicalis
XM_031895720 XM_031895720.1 XP_031751580.1 uncharacterized protein LOC100170425 isoform X2 1216 bp XP_031751580 X. tropicalis
NM_001090133 NM_001090133.1 uncharacterized protein LOC399015 1252 bp NP_001083602 X. laevis.L
XM_018244923 XM_018244923.2 uncharacterized protein LOC399015 isoform X1 1219 bp XP_018100412 X. laevis.L

Models - Gene (27)

Source Version Model Species
NCBI 10.1 XBXL10_1g8095 X. laevis.L
NCBI 10.0 XBXT10g001166 X. tropicalis
ENSEMBL 10.0 XB5807236 [provisional] X. tropicalis
Xenbase 9.2 gene3301 X. laevis.L
JGI 9.1 Xelaev18013406m.g X. laevis.L
Xenbase 9.1 gene7234 X. tropicalis
ENSEMBL 9.1 XB5807236 X. tropicalis
JGI 8.0 Xetrov14010076m.g X. tropicalis
JGI 7.2 Xelaev16014291m.g X. laevis.L
JGI 7.1 Xetro.B01359 X. tropicalis
JGI 6.0 XeXenL6RMv10009667m.g X. laevis.L
JGI 6.0 XeXenL6RMv10009671m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000025417 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_522000008 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_5220004 X. tropicalis
JGI 4.1 e_gw1.522.13.1 X. tropicalis
JGI 4.1 e_gw1.522.53.1 X. tropicalis
JGI 4.1 e_gw1.522.55.1 X. tropicalis
JGI 4.1 gw1.522.13.1 X. tropicalis
JGI 4.1 gw1.522.53.1 X. tropicalis
JGI 4.1 gw1.522.55.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_5220006 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5220013 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5220053 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5220055 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_522000004 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5220008 X. tropicalis

mRNAs based on gene models(29)

Source Version Model Species
NCBI 10.1 XBmRNA15315 X. laevis.L
NCBI 10.0 mRNA005832 X. tropicalis
ENSEMBL 10.0 ENSXETT00000009607 X. tropicalis
Xenbase 9.2 rna9572 X. laevis.L
Xenbase 9.1 rna23390 X. tropicalis
ENSEMBL 9.1 ENSXETT00000009607 X. tropicalis
JGI 9.1 Xelaev18013406m X. laevis.L
JGI 8.0 Xetrov14010076m X. tropicalis
JGI 7.2 Xelaev16014291m X. laevis.L
JGI 7.1 Xetro.B01359.3 X. tropicalis
JGI 7.1 Xetro.B01359.2 X. tropicalis
JGI 7.1 Xetro.B01359.1 X. tropicalis
JGI 6.0 XeXenL6RMv10009667m X. laevis.L
JGI 6.0 XeXenL6RMv10009671m X. laevis.L
JGI 4.1 gw1.522.55.1 X. tropicalis
JGI 4.1 gw1.522.13.1 X. tropicalis
JGI 4.1 e_gw1.522.53.1 X. tropicalis
JGI 4.1 e_gw1.522.55.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000009607 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_5220004 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_5220008 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_5220006 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5220013 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5220053 X. tropicalis
JGI 4.1 estExt_Genewise1.C_5220055 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_522000004 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_522000008 X. tropicalis
JGI 4.1 e_gw1.522.13.1 X. tropicalis
JGI 4.1 gw1.522.53.1 X. tropicalis

mRNAs from cDNA libraries (8)

Clone Accession Species Library Anatomy Stage
IMAGE:8931605 BC166968 X. tropicalis NICHD_XGC_tropThy1 thymus frog
NM_001130203 X. tropicalis
XM_012956533 X. tropicalis
XM_031895719 X. tropicalis
XM_031895720 X. tropicalis
IMAGE:4030774 BC061680 X. laevis.L
NM_001090133 X. laevis.L
XM_018244923 X. laevis.L

ESTs (13)

Clone Accession 5'/3' Species Library Anatomy Stage
CAAO7844 CX941747 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:8870868 EL713108 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8931605 EL666664 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8870868 EL713107 3' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
CAAO7844 CX941746 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:8931605 EL666663 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:6868497 CA981882 5' X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
XL483m06ex BP698124 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
xl239c13 DC105456 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL199m08 BJ622094 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
rxl239c13 DC071185 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL483m06ex BP731247 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL199m08 BJ638776 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5