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Summary Expression Phenotypes Gene Literature (0) GO Terms (51) Nucleotides (125) Proteins (60) Interactants (15) Wiki
XB-GENEPAGE-5757719

Show:     All X. tropicalis X. laevis

Nucleotide sequences for clstn3 - All

RefSeq mRNAs(7)
Models - Gene (31)
Models - mRNA (43)
mRNAs (9)
ESTs (23)

RefSeq mRNAs (7)

Accession Version Protein Name Length Protein Species
NM_001097270 NM_001097270.1 calsyntenin-3 precursor 4213 bp NP_001090739 X. tropicalis
XM_012965819 XM_012965819.3 calsyntenin-3 isoform X1 4197 bp XP_012821273 X. tropicalis
XM_018225027 XM_018225027.2 calsyntenin-3 isoform X2 4352 bp XP_018080516 X. laevis.L
XM_041570174 XM_041570174.1 XP_041426108.1 calsyntenin-3 isoform X1 3977 bp XP_041426108 X. laevis.L
XM_041570175 XM_041570175.1 XP_041426109.1 calsyntenin-3 isoform X1 3975 bp XP_041426109 X. laevis.L
XM_018225026 XM_018225026.2 calsyntenin-3 isoform X1 4354 bp XP_018080515 X. laevis.L
NM_001092682 NM_001092682.1 calsyntenin 3 S homeolog precursor 4243 bp NP_001086151 X. laevis.S

Models - Gene (31)

Source Version Model Species
NCBI 10.1 XBXL10_1g32436 X. laevis.S
NCBI 10.1 XBXL10_1g30117 X. laevis.L
NCBI 10.0 XBXT10g007555 X. tropicalis
ENSEMBL 10.0 clstn3 X. tropicalis
Xenbase 9.2 gene5547 X. laevis.S
Xenbase 9.2 gene470 X. laevis.L
JGI 9.1 Xelaev18036703m.g X. laevis.S
JGI 9.1 Xelaev18034348m.g X. laevis.L
Xenbase 9.1 gene2646 X. tropicalis
ENSEMBL 9.1 clstn3 X. tropicalis
JGI 8.0 Xetrov14028282m.g X. tropicalis
JGI 7.2 Xelaev16022362m.g X. laevis.S
JGI 7.1 Xetro.G00200 X. tropicalis
JGI 6.0 XeXenL6RMv10031818m.g X. laevis.S
JGI 6.0 XeXenL6RMv10012522m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000023916 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_7350005 X. tropicalis
JGI 4.1 e_gw1.735.1.1 X. tropicalis
JGI 4.1 e_gw1.735.41.1 X. tropicalis
JGI 4.1 e_gw1.735.65.1 X. tropicalis
JGI 4.1 gw1.735.1.1 X. tropicalis
JGI 4.1 gw1.735.41.1 X. tropicalis
JGI 4.1 gw1.735.65.1 X. tropicalis
JGI 4.1 gw1.735.91.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_7350017 X. tropicalis
JGI 4.1 estExt_Genewise1.C_7350001 X. tropicalis
JGI 4.1 estExt_Genewise1.C_7350065 X. tropicalis
JGI 4.1 estExt_Genewise1.C_7350091 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_7350016 X. tropicalis
JGI 4.1 e_gw1.735.91.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_735000016 X. tropicalis

mRNAs based on gene models(43)

Source Version Model Species
NCBI 10.1 XBmRNA56685 X. laevis.L
NCBI 10.1 XBmRNA61187 X. laevis.S
ENSEMBL 10.0 ENSXETT00000084013 X. tropicalis
ENSEMBL 10.0 ENSXETT00000051586 X. tropicalis
ENSEMBL 10.0 ENSXETT00000086426 X. tropicalis
ENSEMBL 10.0 ENSXETT00000083337 X. tropicalis
NCBI 10.0 mRNA037405 X. tropicalis
Xenbase 9.2 rna16239 X. laevis.S
Xenbase 9.2 rna1353 X. laevis.L
JGI 9.1 Xelaev18034348m X. laevis.L
JGI 9.1 Xelaev18036703m X. laevis.S
ENSEMBL 9.1 ENSXETT00000051586 X. tropicalis
ENSEMBL 9.1 ENSXETT00000066284 X. tropicalis
ENSEMBL 9.1 ENSXETT00000068997 X. tropicalis
ENSEMBL 9.1 ENSXETT00000074294 X. tropicalis
ENSEMBL 9.1 ENSXETT00000083337 X. tropicalis
ENSEMBL 9.1 ENSXETT00000084013 X. tropicalis
ENSEMBL 9.1 ENSXETT00000085638 X. tropicalis
ENSEMBL 9.1 ENSXETT00000086426 X. tropicalis
ENSEMBL 9.1 ENSXETT00000097078 X. tropicalis
ENSEMBL 9.1 ENSXETT00000102789 X. tropicalis
Xenbase 9.1 rna8781 X. tropicalis
JGI 8.0 Xetrov14028282m X. tropicalis
JGI 7.2 Xelaev16022362m X. laevis.S
JGI 7.1 Xetro.G00200.1 X. tropicalis
JGI 6.0 XeXenL6RMv10012522m X. laevis.S
JGI 6.0 XeXenL6RMv10031818m X. laevis.S
JGI 4.1 estExt_Genewise1.C_7350065 X. tropicalis
JGI 4.1 estExt_Genewise1.C_7350091 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_735000016 X. tropicalis
ENSEMBL 4.1 ENSXETT00000051586 X. tropicalis
JGI 4.1 gw1.735.1.1 X. tropicalis
JGI 4.1 gw1.735.41.1 X. tropicalis
JGI 4.1 gw1.735.65.1 X. tropicalis
JGI 4.1 gw1.735.91.1 X. tropicalis
JGI 4.1 e_gw1.735.91.1 X. tropicalis
JGI 4.1 e_gw1.735.1.1 X. tropicalis
JGI 4.1 e_gw1.735.65.1 X. tropicalis
JGI 4.1 e_gw1.735.41.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_7350016 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_7350005 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_7350017 X. tropicalis
JGI 4.1 estExt_Genewise1.C_7350001 X. tropicalis

mRNAs from cDNA libraries (9)

Clone Accession Species Library Anatomy Stage
NM_001097270 X. tropicalis
XM_012965819 X. tropicalis
IMAGE:7653423 BC129013 X. tropicalis NIH_XGC_tropBrn3 brain frog
XM_018225027 X. laevis.L
XM_041570174 X. laevis.L
IMAGE:6946776 BC074262 X. laevis.S
XM_041570175 X. laevis.L
NM_001092682 X. laevis.S
XM_018225026 X. laevis.L

ESTs (23)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7657428 CX829424 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7653423 CX822114 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7666102 CX852442 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7652559 CX815330 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7670262 CX877236 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7655491 CX825731 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7696029 CX925431 5' X. tropicalis NIH_XGC_tropTe4 testis frog
xtbs02G19 CN072612 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:9017461 EL865223 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7640736 CX794417 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7655687 CX825767 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
TTpA065e18 BX726645 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7657428 CX829423 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
TTpA065e18 BX726646 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7652559 CX815329 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7653423 CX822113 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7655491 CX825730 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7655687 CX825766 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7666102 CX852441 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7670262 CX877235 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7696029 CX925430 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:9017461 EL865224 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8822711 EG583652 5' X. laevis.S NICHD_XGC_int_m whole organism NF stage 56 to NF stage 62