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Summary Expression Phenotypes Gene Literature (0) GO Terms (29) Nucleotides (93) Proteins (40) Interactants (25) Wiki
XB-GENEPAGE-5753534

Show:     All X. tropicalis X. laevis

Nucleotide sequences for rhbdd1 - All

RefSeq mRNAs(7)
Models - Gene (21)
Models - mRNA (24)
mRNAs (9)
ESTs (6)

RefSeq mRNAs (7)

Accession Version Protein Name Length Protein Species
NM_001016449 NM_001016449.2 rhomboid-related protein 4 1729 bp NP_001016449 X. tropicalis
XM_012963006 XM_012963006.3 rhomboid-related protein 4 isoform X1 1779 bp XP_012818460 X. tropicalis
NM_001094094 NM_001094094.1 rhomboid domain containing 1 L homeolog 1604 bp NP_001087563 X. laevis.L
XM_018262002 XM_018262002.2 rhomboid domain containing 1 L homeolog isoform X1 1733 bp XP_018117491 X. laevis.L
XM_018262003 XM_018262003.2 rhomboid domain containing 1 L homeolog isoform X1 1833 bp XP_018117492 X. laevis.L
XM_041562235 XM_041562235.1 XP_041418169.1 rhomboid domain containing 1 L homeolog isoform X1 2861 bp XP_041418169 X. laevis.L
XM_041562236 XM_041562236.1 XP_041418170.1 rhomboid domain containing 1 L homeolog isoform X2 1744 bp XP_041418170 X. laevis.L

Models - Gene (21)

Source Version Model Species
NCBI 10.1 XBXL10_1g24098 X. laevis.L
NCBI 10.0 XBXT10g002339 X. tropicalis
ENSEMBL 10.0 rhbdd1 X. tropicalis
Xenbase 9.2 gene14532 X. laevis.L
JGI 9.1 Xelaev18027717m.g X. laevis.L
Xenbase 9.1 gene2473 X. tropicalis
ENSEMBL 9.1 rhbdd1 X. tropicalis
JGI 8.0 Xetrov14022089m.g X. tropicalis
JGI 7.2 Xelaev16020703m.g X. laevis.L
JGI 7.1 Xetro.E00330 X. tropicalis
JGI 6.0 XeXenL6RMv10001330m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000020088 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_262000009 X. tropicalis
JGI 4.1 e_gw1.262.113.1 X. tropicalis
JGI 4.1 e_gw1.262.79.1 X. tropicalis
JGI 4.1 e_gw1.262.97.1 X. tropicalis
JGI 4.1 gw1.262.113.1 X. tropicalis
JGI 4.1 gw1.262.79.1 X. tropicalis
JGI 4.1 gw1.262.97.1 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_262000004 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_262000021 X. tropicalis

mRNAs based on gene models(24)

Source Version Model Species
NCBI 10.1 XBmRNA45074 X. laevis.L
NCBI 10.0 mRNA011842 X. tropicalis
ENSEMBL 10.0 ENSXETT00000043382 X. tropicalis
ENSEMBL 10.0 ENSXETT00000067430 X. tropicalis
Xenbase 9.2 rna42324 X. laevis.L
ENSEMBL 9.1 ENSXETT00000043382 X. tropicalis
Xenbase 9.1 rna8213 X. tropicalis
JGI 9.1 Xelaev18027717m X. laevis.L
ENSEMBL 9.1 ENSXETT00000067430 X. tropicalis
JGI 8.0 Xetrov14022089m X. tropicalis
JGI 7.2 Xelaev16020703m X. laevis.L
JGI 7.1 Xetro.E00330.1 X. tropicalis
JGI 7.1 Xetro.E00330.2 X. tropicalis
JGI 6.0 XeXenL6RMv10001330m X. laevis.L
JGI 4.1 gw1.262.79.1 X. tropicalis
JGI 4.1 e_gw1.262.79.1 X. tropicalis
JGI 4.1 e_gw1.262.97.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000043382 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_262000021 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_262000009 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_262000004 X. tropicalis
JGI 4.1 gw1.262.113.1 X. tropicalis
JGI 4.1 e_gw1.262.113.1 X. tropicalis
JGI 4.1 gw1.262.97.1 X. tropicalis

mRNAs from cDNA libraries (9)

Clone Accession Species Library Anatomy Stage
TEgg011c10 CR760998 X. tropicalis
NM_001016449 X. tropicalis
XM_012963006 X. tropicalis
IMAGE:6944940 BC080107 X. laevis.L
NM_001094094 X. laevis.L
XM_018262002 X. laevis.L
XM_018262003 X. laevis.L
XM_041562235 X. laevis.L
XM_041562236 X. laevis.L

ESTs (6)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7566031 CX482708 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA043p17 CR443105 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7706942 CX959433 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7566031 CX482707 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7706942 CX959432 3' X. tropicalis NIH_XGC_tropTe5 testis frog
rxl296o18 DC087341 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15