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Summary Expression Phenotypes Gene Literature (1) GO Terms (18) Nucleotides (296) Proteins (63) Interactants (32) Wiki
XB-GENEPAGE-5752936

Show:     All X. tropicalis X. laevis

Nucleotide sequences for ythdf3 - Xenopus tropicalis

RefSeq mRNAs(6)
Models - Gene (16)
Models - mRNA (18)
mRNAs (8)
ESTs (64)

RefSeq mRNAs (6)

Accession Version Protein Name Length Protein Species
NM_001126961 NM_001126961.1 YTH domain-containing family protein 3 2550 bp NP_001120433 X. tropicalis
XM_012964301 XM_012964301.3 YTH domain-containing family protein 3 isoform X1 2740 bp XP_012819755 X. tropicalis
XM_012964303 XM_012964303.3 YTH domain-containing family protein 3 isoform X2 2977 bp XP_012819757 X. tropicalis
XM_012964304 XM_012964304.3 YTH domain-containing family protein 3 isoform X2 2943 bp XP_012819758 X. tropicalis
XM_012964305 XM_012964305.3 YTH domain-containing family protein 3 isoform X2 2729 bp XP_012819759 X. tropicalis
XM_012964307 XM_012964307.3 YTH domain-containing family protein 3 isoform X2 2774 bp XP_012819761 X. tropicalis

Models - Gene (16)

Source Version Model Species
NCBI 10.0 XBXT10g015476 X. tropicalis
ENSEMBL 10.0 ythdf3 X. tropicalis
Xenbase 9.1 gene34181 X. tropicalis
ENSEMBL 9.1 ythdf3 X. tropicalis
JGI 8.0 Xetrov14025703m.g X. tropicalis
ENSEMBL 4.1 ENSXETG00000021659 X. tropicalis
JGI 4.1 gw1.189.7.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_189000035 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_189000036 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_189000015 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_189000011 X. tropicalis
JGI 4.1 e_gw1.189.57.1 X. tropicalis
JGI 4.1 e_gw1.189.69.1 X. tropicalis
JGI 4.1 e_gw1.189.7.1 X. tropicalis
JGI 4.1 gw1.189.57.1 X. tropicalis
JGI 4.1 gw1.189.69.1 X. tropicalis

mRNAs based on gene models(18)

Source Version Model Species
ENSEMBL 10.0 ENSXETT00000104569 X. tropicalis
ENSEMBL 10.0 ENSXETT00000046817 X. tropicalis
NCBI 10.0 mRNA076558 X. tropicalis
ENSEMBL 9.1 ENSXETT00000104569 X. tropicalis
Xenbase 9.1 rna64301 X. tropicalis
ENSEMBL 9.1 ENSXETT00000046817 X. tropicalis
JGI 8.0 Xetrov14025703m X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_189000015 X. tropicalis
JGI 4.1 gw1.189.57.1 X. tropicalis
JGI 4.1 gw1.189.69.1 X. tropicalis
JGI 4.1 gw1.189.7.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_189000035 X. tropicalis
JGI 4.1 e_gw1.189.69.1 X. tropicalis
JGI 4.1 e_gw1.189.7.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000046817 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_189000011 X. tropicalis
JGI 4.1 e_gw1.189.57.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_189000036 X. tropicalis

mRNAs from cDNA libraries (8)

Clone Accession Species Library Anatomy Stage
IMAGE:7876378 BC161192 X. tropicalis
TGas088a05 CT025387 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
NM_001126961 X. tropicalis
XM_012964301 X. tropicalis
XM_012964303 X. tropicalis
XM_012964304 X. tropicalis
XM_012964305 X. tropicalis
XM_012964307 X. tropicalis

ESTs (64)

Clone Accession 5'/3' Species Library Anatomy Stage
TGas003j08 AL594068 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu023p20 AL639281 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:5384756 BQ392865 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:6995115 CF239562 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:6978547 CF149775 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:7017145 CF524967 5' X. tropicalis NICHD_XGC_Swb1 whole organism frog
TTbA055i12 CR433971 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7593661 CX330261 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7785835 CX316673 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7551331 CX510778 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7561613 CX465116 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7525652 CX443157 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7525644 CX443127 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7654783 CX824032 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7664906 CX849813 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
CAAO9422 CX957773 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7698338 CX930817 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7715044 CX974757 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7713431 CX971749 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7735462 DN021423 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7804086 DR839434 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:8945703 EG653258 5' X. tropicalis NICHD_XGC_tropInt_54 intestine frog
IMAGE:8950302 EG652508 5' X. tropicalis NICHD_XGC_tropInt_60 intestine frog
IMAGE:8958198 EL654688 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
IMAGE:8923680 EL668682 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8910617 EL806298 5' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
TGas097b03 AL970853 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas113b22 AL968103 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas111p15 AL967792 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas121n14 AL967414 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas132a11 AL965441 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas107b05 AL962770 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas102l20 AL958456 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas088a05 AL955533 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas036j24 AL651750 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
L1G11h05 AL639060 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu095b23 AL803404 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu095b21 AL803403 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu016l17 AL642882 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas113b22 BX755097 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas107b05 BX754419 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas102l20 BX753507 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas088a05 BX751789 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7654783 CX824031 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:5379383 BQ523761 3' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:7713431 CX971748 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
TTbA055i12 CR433972 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas121n14 AL967413 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7664906 CX849812 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:8923680 EL668681 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:7593661 CX330260 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
CAAO9422 CX957772 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7785835 CX316672 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7735462 DN021422 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
TGas132a11 BX758961 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu095b23 BX694157 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu095b21 BX694156 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7551331 CX510777 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7698338 CX930816 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7561613 CX465115 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8910617 EL806299 3' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:7715044 CX974756 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:5384756 BQ392864 3' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:7804086 DR839433 3' X. tropicalis NIH_XGC_tropFat1 fat body frog