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Summary Expression Phenotypes Gene Literature (0) GO Terms (2) Nucleotides (240) Proteins (52) Interactants (9) Wiki
XB-GENEPAGE-5742237

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for thumpd1 - Xenopus laevis

RefSeq mRNAs(3)
Models - Gene (9)
Models - mRNA (9)
mRNAs (7)
ESTs (52)

RefSeq mRNAs (3)

Accession Version name Length Protein Species
NM_001094700 NM_001094700.1 THUMP domain containing 1 S homeolog 2059 bp NP_001088169 X. laevis.S
XM_041576454 XM_041576454.1 XP_041432388.1 THUMP domain-containing protein 1 isoform X2 1063 bp XP_041432388 X. laevis.L
XM_041576453 XM_041576453.1 XP_041432387.1 THUMP domain-containing protein 1 isoform X1 1632 bp XP_041432387 X. laevis.L

Models - Gene (9)

Source Version Model Species
NCBI 10.1 XBXL10_1g43806 X. laevis.S
NCBI 10.1 XBXL10_1g41089 X. laevis.L
JGI 9.1 Xelaev18047503m.g X. laevis.S
JGI 9.1 Xelaev18045173m.g X. laevis.L
Xenbase 9.2 gene12183 X. laevis.S
Xenbase 9.2 gene10377 X. laevis.L
JGI 7.2 Xelaev16031192m.g X. laevis.S
JGI 6.0 XeXenL6RMv10004559m.g X. laevis.S
JGI 6.0 XeXenL6RMv10055026m.g X. laevis.S

mRNAs based on gene models(9)

Source Version Model Species
NCBI 10.1 XBmRNA77529 X. laevis.L
NCBI 10.1 XBmRNA82455 X. laevis.S
JGI 9.1 Xelaev18045173m X. laevis.L
JGI 9.1 Xelaev18047503m X. laevis.S
Xenbase 9.2 rna30163 X. laevis.L
Xenbase 9.2 rna35393 X. laevis.S
JGI 7.2 Xelaev16031192m X. laevis.S
JGI 6.0 XeXenL6RMv10004559m X. laevis.S
JGI 6.0 XeXenL6RMv10055026m X. laevis.S

mRNAs from cDNA libraries (7)

Clone Accession Species Library Anatomy Stage
IMAGE:6863500 BC084077 X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
NM_001094700 X. laevis.S
XM_018237564 X. laevis.S
XM_018236320 X. laevis.L
XM_018236319 X. laevis.L
XM_041576454 X. laevis.L
XM_041576453 X. laevis.L

ESTs (52)

Clone Accession 5'/3' Species Library Anatomy Stage
xl341k21 DC135413 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl248j10 DC108329 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl303k18 DC124136 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl231c02 DC103010 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl322c15 DC129645 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xlk4i24ex DC054089 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk72k07ex DC058581 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk160l01ex DC064315 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL520c07ex BP707221 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL515l21ex BP705723 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL451f04ex BP686462 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL429k17ex BP678386 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL403i22ex BP682384 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL509c12ex BP703645 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL477h01ex BP695419 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL475j14ex BP694792 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL471i06ex BP693756 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL411e07ex BP672630 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL220p13 BJ628241 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL199g11 BJ621998 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL172i24 BJ615555 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL168m03 BJ614609 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL057b09 BJ075299 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL087e08 BJ075044 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL095h15 BJ071783 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL060a10 BJ058644 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL049l12 BJ039518 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:5514748 CF287228 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:6863500 CA986964 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6863378 CA986858 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6865757 CA793741 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:5161641 CA791457 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6636423 BU910591 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:3400929 BG037561 5' X. laevis.S NICHD_XGC_Emb3 whole organism NF stage 24 to NF stage 25
IMAGE:4059141 BG018563 5' X. laevis.S Wellcome CRC pCS2+ st19-26 whole organism NF stage 19 to NF stage 26
IMAGE:3748078 BE681152 5' X. laevis.S Xenopus laevis gastrula non normalized whole organism NF stage 10.5 to NF stage 11.5
rxl303k18 DC089255 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL520c07ex BP739537 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL509c12ex BP736545 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL477h01ex BP729364 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL471i06ex BP727845 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL403i22ex BP718714 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL429k17ex BP715406 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL411e07ex BP710640 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL199g11 BJ638679 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL172i24 BJ632180 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL168m03 BJ631309 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL057b09 BJ092682 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL087e08 BJ092435 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL095h15 BJ088894 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL060a10 BJ077150 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL049l12 BJ054242 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15