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Summary Expression Phenotypes Gene Literature (0) GO Terms (3) Nucleotides (178) Proteins (57) Interactants (16) Wiki
XB-GENEPAGE-5739973

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for rffl - Xenopus tropicalis

RefSeq mRNAs(1)
Models - Gene (16)
Models - mRNA (21)
mRNAs (4)
ESTs (28)

RefSeq mRNAs (1)

Accession Version name Length Protein Species
NM_001017296 NM_001017296.3 E3 ubiquitin-protein ligase rififylin 4524 bp NP_001017296 X. tropicalis

Models - Gene (16)

Source Version Model Species
NCBI 10.0 XBXT10g018447 X. tropicalis
ENSEMBL 10.0 rffl X. tropicalis
Xenbase 9.1 gene1120 X. tropicalis
ENSEMBL 9.1 rffl X. tropicalis
JGI 8.0 Xetrov14008840m.g X. tropicalis
JGI 7.1 Xetro.B00538 X. tropicalis
ENSEMBL 4.1 ENSXETG00000022465 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_92000008 X. tropicalis
JGI 4.1 e_gw1.92.176.1 X. tropicalis
JGI 4.1 e_gw1.92.177.1 X. tropicalis
JGI 4.1 e_gw1.92.25.1 X. tropicalis
JGI 4.1 gw1.92.176.1 X. tropicalis
JGI 4.1 gw1.92.177.1 X. tropicalis
JGI 4.1 gw1.92.25.1 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_92000005 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_92000034 X. tropicalis

mRNAs based on gene models(21)

Source Version Model Species
NCBI 10.0 mRNA091054 X. tropicalis
ENSEMBL 10.0 ENSXETT00000068540 X. tropicalis
ENSEMBL 10.0 ENSXETT00000048630 X. tropicalis
ENSEMBL 10.0 ENSXETT00000105394 X. tropicalis
Xenbase 9.1 rna3588 X. tropicalis
ENSEMBL 9.1 ENSXETT00000068540 X. tropicalis
ENSEMBL 9.1 ENSXETT00000048630 X. tropicalis
JGI 8.0 Xetrov14008840m X. tropicalis
JGI 7.1 Xetro.B00538.2 X. tropicalis
JGI 7.1 Xetro.B00538.1 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_92000008 X. tropicalis
ENSEMBL 4.1 ENSXETT00000048630 X. tropicalis
ENSEMBL 4.1 ENSXETT00000048636 X. tropicalis
JGI 4.1 e_gw1.92.176.1 X. tropicalis
JGI 4.1 e_gw1.92.177.1 X. tropicalis
JGI 4.1 e_gw1.92.25.1 X. tropicalis
JGI 4.1 gw1.92.176.1 X. tropicalis
JGI 4.1 gw1.92.177.1 X. tropicalis
JGI 4.1 gw1.92.25.1 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_92000005 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_92000034 X. tropicalis

mRNAs from cDNA libraries (4)

Clone Accession Species Library Anatomy Stage
NM_001017296 X. tropicalis
TGas006p10 CR855622 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:5336090 BC090590 X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
XM_012957057 X. tropicalis

ESTs (28)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7602006 CX365714 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7545184 CX487806 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7539562 CX452690 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7560588 CX463676 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7636612 DR902728 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7688737 CX911892 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7643872 CX800001 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7562402 CX466930 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7525668 CX443035 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA063l07 CR411998 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
xthr13M20 CN097716 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TGas125i01 AL961768 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA023b10 BX715128 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TGas006p10 AL594540 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:5336090 BQ521141 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:8933862 EL635287 3' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
rst112b16 DC165080 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7643872 CX800000 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7545184 CX487805 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7562402 CX466929 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7560588 CX463675 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7539562 CX452689 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7636612 CX406822 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTbA015m14 CR428613 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA063l07 CR411999 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
xthr13M20 CN097715 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TGas125i01 BX757819 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:5336090 BQ521140 3' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27