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Summary Expression Phenotypes Gene Literature (0) GO Terms (0) Nucleotides (127) Proteins (65) Interactants (5) Wiki
XB-GENEPAGE-5737776

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for lrrc42 - All

RefSeq mRNAs(7)
Models - Gene (31)
Models - mRNA (34)
mRNAs (11)
ESTs (32)

RefSeq mRNAs (7)

Accession Version name Length Protein Species
NM_001276689 NM_001276689.1 leucine-rich repeat-containing protein 42 isoform 2 1868 bp NP_001263618 X. tropicalis
XM_012961278 XM_012961278.3 leucine-rich repeat-containing protein 42 isoform X1 1952 bp XP_012816732 X. tropicalis
XM_012961279 XM_012961279.3 leucine-rich repeat-containing protein 42 isoform X1 1955 bp XP_012816733 X. tropicalis
XM_012961280 XM_012961280.3 leucine-rich repeat-containing protein 42 isoform X1 1903 bp XP_012816734 X. tropicalis
NM_001276688 NM_001276688.1 leucine-rich repeat-containing protein 42 isoform 1 1960 bp NP_001263617 X. tropicalis
XM_041590478 XM_041590478.1 XP_041446412.1 leucine-rich repeat-containing protein 42 4081 bp XP_041446412 X. laevis.L
XM_041590479 XM_041590479.1 XP_041446413.1 leucine-rich repeat-containing protein 42 1760 bp XP_041446413 X. laevis.L

Models - Gene (31)

Source Version Model Species
NCBI 10.0 XBXT10g013506 X. tropicalis
NCBI 10.1 XBXL10_1g19276 X. laevis.L
ENSEMBL 10.0 lrrc42 X. tropicalis
JGI 9.1 Xelaev18023201m.g X. laevis.L
Xenbase 9.1 gene8139 X. tropicalis
Xenbase 9.2 gene35350 X. laevis.L
ENSEMBL 9.1 lrrc42 X. tropicalis
JGI 8.0 Xetrov14019356m.g X. tropicalis
JGI 7.1 Xetro.D02006 X. tropicalis
JGI 7.2 Xelaev16061091m.g X. laevis.L
JGI 6.0 XeXenL6RMv10055288m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000019986 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_1000044 X. tropicalis
JGI 4.1 e_gw1.1.149.1 X. tropicalis
JGI 4.1 e_gw1.1.377.1 X. tropicalis
JGI 4.1 e_gw1.1.378.1 X. tropicalis
JGI 4.1 gw1.1.378.1 X. tropicalis
JGI 4.1 gw1.1.149.1 X. tropicalis
JGI 4.1 gw1.1.377.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_10094 X. tropicalis
JGI 4.1 estExt_Genewise1.C_10149 X. tropicalis
JGI 4.1 estExt_Genewise1.C_10375 X. tropicalis
JGI 4.1 estExt_Genewise1.C_10376 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_10044 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_10173 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_10174 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_10054 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_1000024 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_1000174 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_1000175 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_1000055 X. tropicalis

mRNAs based on gene models(34)

Source Version Model Species
NCBI 10.0 mRNA066915 X. tropicalis
NCBI 10.1 XBmRNA35630 X. laevis.L
ENSEMBL 10.0 ENSXETT00000118019 X. tropicalis
ENSEMBL 10.0 ENSXETT00000061929 X. tropicalis
JGI 9.1 Xelaev18023201m X. laevis.L
Xenbase 9.1 rna26271 X. tropicalis
Xenbase 9.2 rna75302 X. laevis.L
ENSEMBL 9.1 ENSXETT00000061929 X. tropicalis
JGI 8.0 Xetrov14019356m X. tropicalis
JGI 7.1 Xetro.D02006.2 X. tropicalis
JGI 7.1 Xetro.D02006.3 X. tropicalis
JGI 7.1 Xetro.D02006.1 X. tropicalis
JGI 7.2 Xelaev16061091m X. laevis.L
JGI 6.0 XeXenL6RMv10055288m X. laevis.L
JGI 4.1 fgenesh1_kg.C_scaffold_1000044 X. tropicalis
ENSEMBL 4.1 ENSXETT00000043212 X. tropicalis
JGI 4.1 e_gw1.1.149.1 X. tropicalis
JGI 4.1 e_gw1.1.377.1 X. tropicalis
JGI 4.1 e_gw1.1.378.1 X. tropicalis
JGI 4.1 gw1.1.378.1 X. tropicalis
JGI 4.1 gw1.1.149.1 X. tropicalis
JGI 4.1 gw1.1.377.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_10094 X. tropicalis
JGI 4.1 estExt_Genewise1.C_10149 X. tropicalis
JGI 4.1 estExt_Genewise1.C_10375 X. tropicalis
JGI 4.1 estExt_Genewise1.C_10376 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_10044 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_10173 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_10174 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_10054 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_1000024 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_1000174 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_1000175 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_1000055 X. tropicalis

mRNAs from cDNA libraries (11)

Clone Accession Species Library Anatomy Stage
IMAGE:7708225 BC121343 X. tropicalis NIH_XGC_tropTe5 testis frog
TNeu081j24 CR760321 X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
NM_001276689 X. tropicalis
NM_001276688 X. tropicalis
XM_012961280 X. tropicalis
XM_012961279 X. tropicalis
XM_012961278 X. tropicalis
IMAGE:6636856 BC098987 X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6863997 BC078092 X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
XM_041590479 X. laevis.L
XM_041590478 X. laevis.L

ESTs (32)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8858928 EL822989 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8926494 EL673055 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:7561107 CX463948 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7708225 CX961116 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7526762 CX444362 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA060a07 CR419250 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TNeu081j24 AL800649 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu103c24 AL790918 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:9017583 EL865948 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8858928 EL822990 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8926494 EL673054 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:7708225 CX961115 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7561107 CX463947 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA060a07 CR419251 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TNeu081j24 BX696688 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu103c24 BX693249 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
xl257h04 DC110992 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl286p21 DC119449 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL456l02ex BP688202 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL453b24ex BP687068 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL206o08 BJ624017 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL192h17 BJ620289 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL187c15 BJ618907 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL024g11 BJ035834 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL023g11 BJ035531 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:6863997 CA987369 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6862602 CA986348 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6636856 BU910952 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
PBX0006E05 AW633337 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
rxl286p21 DC084703 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL192h17 BJ636919 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL024g11 BJ050433 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15