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Summary Expression Phenotypes Gene Literature (1) GO Terms (15) Nucleotides (164) Proteins (44) Interactants (64) Wiki
XB-GENEPAGE-5734089

Show:     All X. tropicalis X. laevis

Nucleotide sequences for trappc5 - All

RefSeq mRNAs(6)
Models - Gene (30)
Models - mRNA (30)
mRNAs (9)
ESTs (61)

RefSeq mRNAs (6)

Accession Version Protein Name Length Protein Species
NM_001045674 NM_001045674.1 trafficking protein particle complex subunit 5 1334 bp NP_001039139 X. tropicalis
XM_012952529 XM_012952529.3 trafficking protein particle complex subunit 5 isoform X1 1235 bp XP_012807983 X. tropicalis
NM_001093026 NM_001093026.1 trafficking protein particle complex subunit 5 L homeolog 2398 bp NP_001086495 X. laevis.L
XM_018234416 XM_018234416.2 trafficking protein particle complex subunit 5 L homeolog isoform X1 2660 bp XP_018089905 X. laevis.L
XM_018234417 XM_018234417.2 trafficking protein particle complex subunit 5 L homeolog isoform X1 2452 bp XP_018089906 X. laevis.L
XM_018234420 XM_018234420.2 trafficking protein particle complex subunit 5 L homeolog isoform X1 2450 bp XP_018089909 X. laevis.L

Models - Gene (30)

Source Version Model Species
NCBI 10.1 XBXL10_1g39754 X. laevis.L
NCBI 10.0 XBXT10g006861 X. tropicalis
ENSEMBL 10.0 trappc5 X. tropicalis
Xenbase 9.2 gene6335 X. laevis.L
JGI 9.1 Xelaev18043778m.g X. laevis.L
Xenbase 9.1 gene2097 X. tropicalis
JGI 8.0 Xetrov14041058m.g X. tropicalis
JGI 7.2 Xelaev16042492m.g X. laevis.L
JGI 7.1 Xetro.J00441 X. tropicalis
JGI 6.0 XeXenL6RMv10041140m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000001289 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_290003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_290009 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_29000003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_290002 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_29000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_29000009 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_29000010 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_29000002 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_290010 X. tropicalis
JGI 4.1 e_gw1.29.23.1 X. tropicalis
JGI 4.1 e_gw1.29.414.1 X. tropicalis
JGI 4.1 e_gw1.29.455.1 X. tropicalis
JGI 4.1 gw1.29.23.1 X. tropicalis
JGI 4.1 gw1.29.414.1 X. tropicalis
JGI 4.1 gw1.29.455.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_290004 X. tropicalis
JGI 4.1 estExt_Genewise1.C_290023 X. tropicalis
JGI 4.1 estExt_Genewise1.C_290414 X. tropicalis
JGI 4.1 estExt_Genewise1.C_290455 X. tropicalis

mRNAs based on gene models(30)

Source Version Model Species
NCBI 10.1 XBmRNA74786 X. laevis.L
ENSEMBL 10.0 ENSXETT00000114010 X. tropicalis
NCBI 10.0 mRNA033958 X. tropicalis
Xenbase 9.2 rna18531 X. laevis.L
Xenbase 9.1 rna6889 X. tropicalis
JGI 9.1 Xelaev18043778m X. laevis.L
JGI 8.0 Xetrov14041058m X. tropicalis
JGI 7.2 Xelaev16042492m X. laevis.L
JGI 7.1 Xetro.J00441.1 X. tropicalis
JGI 6.0 XeXenL6RMv10041140m X. laevis.L
JGI 4.1 estExt_Genewise1.C_290414 X. tropicalis
JGI 4.1 estExt_Genewise1.C_290455 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_29000003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_29000009 X. tropicalis
JGI 4.1 e_gw1.29.23.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_29000002 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_29000003 X. tropicalis
JGI 4.1 gw1.29.23.1 X. tropicalis
JGI 4.1 gw1.29.414.1 X. tropicalis
JGI 4.1 gw1.29.455.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_29000010 X. tropicalis
JGI 4.1 e_gw1.29.414.1 X. tropicalis
JGI 4.1 e_gw1.29.455.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000002760 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_290003 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_290009 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_290010 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_290002 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_290004 X. tropicalis
JGI 4.1 estExt_Genewise1.C_290023 X. tropicalis

mRNAs from cDNA libraries (9)

Clone Accession Species Library Anatomy Stage
IMAGE:7732529 BC155006 X. tropicalis
TEgg060d13 CR942515 X. tropicalis
NM_001045674 X. tropicalis
XM_012952529 X. tropicalis
IMAGE:3403042 BC076644 X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
NM_001093026 X. laevis.L
XM_018234416 X. laevis.L
XM_018234417 X. laevis.L
XM_018234420 X. laevis.L

ESTs (61)

Clone Accession 5'/3' Species Library Anatomy Stage
TTpA030n19 BX719511 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA020g19 BX711969 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
THdA012c06 CR561660 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA028b10 CR413598 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
xthr01B01 CN095008 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
THdA007m03 CR560045 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
xtbs23I22 CN083930 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xthr33O21 CN109154 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TNeu008d20 AL634723 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
xthr29H10 CN106608 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr27L10 CN105588 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TGas040i13 AL653777 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
xtbs19C14 CN081300 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs03M22 CN073447 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:8920903 EL835115 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7848760 DT533891 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7624741 CX402045 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7613818 CX389411 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7597497 CX386409 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
xthr01B01 CN102253 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7564806 CX481231 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7593849 CX330239 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7624741 CX402044 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7026808 CF785222 3' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
TNeu112j18 BX698669 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu084m14 BX701264 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7564806 CX481230 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA028b10 CR413599 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA007m03 CR560046 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA012c06 CR561661 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7597497 CX386408 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7848760 DT533890 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:8920903 EL835116 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
xtbs03M22 CN073446 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs19C14 CN081299 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs23I22 CN083929 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xthr01B01 CN095006 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr01B01 CN095007 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr01B01 CN102252 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr27L10 CN105587 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr28K03 CN105719 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr29H10 CN106607 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr33O21 CN109153 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:6867113 CA982588 5' X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
xl242m13 DC106584 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
PBX0006B08 AW633305 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:8643330 EB736832 5' X. laevis.L NICHD_XGC_skin_m skin unspecified stage
XL170a07 BJ614932 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL158h11 BJ612236 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:6634284 BU908756 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
xlk157c06ex DC063171 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:3403042 BG364732 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
XL510d14ex BP703940 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:6864019 CA987384 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:3749089 BF614933 5' X. laevis.L Xenopus laevis gastrula non normalized whole organism NF stage 10.5 to NF stage 11.5
BE025865 BE025865 5' X. laevis.L Xenopus laevis oocyte oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
XL204e16 BJ623341 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
rxl242m13 DC072221 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL510d14ex BP736813 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL170a07 BJ631621 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
rxlk157c06ex DC029676 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5